Gene : Seita.9G043400 S. italica v2.2
Defline:  (1 of 1) PTHR24349//PTHR24349:SF153 - SERINE/THREONINE-PROTEIN KINASE Genomic Order:  434
Name:  ? Seita.9G043400 Secondary Identifier:  ? PAC:32691426
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G043400 0.5kb upstream 0.5kb upstream 4786 true scaffold_9: 2438664-2443449 Setaria italica
Seita.9G043400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2442950-2443449 Setaria italica
Seita.9G043400 0.5kb downstream 0.5kb downstream 4786 true scaffold_9: 2438164-2442949 Setaria italica
Seita.9G043400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2438164-2438663 Setaria italica
Seita.9G043400 1.0kb upstream 1.0kb upstream 5286 true scaffold_9: 2438664-2443949 Setaria italica
Seita.9G043400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2442950-2443949 Setaria italica
Seita.9G043400 1.0kb downstream 1.0kb downstream 5286 true scaffold_9: 2437664-2442949 Setaria italica
Seita.9G043400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2437664-2438663 Setaria italica
Seita.9G043400 2.0kb upstream 2.0kb upstream 6286 true scaffold_9: 2438664-2444949 Setaria italica
Seita.9G043400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2442950-2444949 Setaria italica
Seita.9G043400 2.0kb downstream 2.0kb downstream 6286 true scaffold_9: 2436664-2442949 Setaria italica
Seita.9G043400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2436664-2438663 Setaria italica
Seita.9G043400 5.0kb upstream 5.0kb upstream 9286 true scaffold_9: 2438664-2447949 Setaria italica
Seita.9G043400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2442950-2447949 Setaria italica
Seita.9G043400 5.0kb downstream 5.0kb downstream 9286 true scaffold_9: 2433664-2442949 Setaria italica
Seita.9G043400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2433664-2438663 Setaria italica
Seita.9G043400 10.0kb upstream 10.0kb upstream 14286 true scaffold_9: 2438664-2452949 Setaria italica
Seita.9G043400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2442950-2452949 Setaria italica
Seita.9G043400 10.0kb downstream 10.0kb downstream 14286 true scaffold_9: 2428664-2442949 Setaria italica
Seita.9G043400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2428664-2438663 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185164 5267 Panicoideae View MSA
124584083 5269 Grass View MSA
122045931 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.352        
cufflinks 8.38        
cufflinks 6.931        
cufflinks 6.224       Low
cufflinks 7.191        
cufflinks 6.691        
cufflinks 9.659        
cufflinks 6.15       Low
cufflinks 7.104        
cufflinks 9.665        
cufflinks 14.905     High  
cufflinks 26.874     High High
cufflinks 19.212     High High
cufflinks 14.757     High  
cufflinks 23.426     High High
cufflinks 7.56        
cufflinks 19.955     High High
cufflinks 8.358        
cufflinks 8.392        
cufflinks 24.443     High High

0 Strain