Gene : Seita.9G131700 S. italica v2.2
Defline:  (1 of 1) PTHR31558:SF3 - CW14 PROTEIN Genomic Order:  1317
Name:  ? Seita.9G131700 Secondary Identifier:  ? PAC:32691492
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G131700 0.5kb upstream 0.5kb upstream 7400 true scaffold_9: 8286167-8293566 Setaria italica
Seita.9G131700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8286167-8286666 Setaria italica
Seita.9G131700 0.5kb downstream 0.5kb downstream 7400 true scaffold_9: 8286667-8294066 Setaria italica
Seita.9G131700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8293567-8294066 Setaria italica
Seita.9G131700 1.0kb upstream 1.0kb upstream 7900 true scaffold_9: 8285667-8293566 Setaria italica
Seita.9G131700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8285667-8286666 Setaria italica
Seita.9G131700 1.0kb downstream 1.0kb downstream 7900 true scaffold_9: 8286667-8294566 Setaria italica
Seita.9G131700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8293567-8294566 Setaria italica
Seita.9G131700 2.0kb upstream 2.0kb upstream 8900 true scaffold_9: 8284667-8293566 Setaria italica
Seita.9G131700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8284667-8286666 Setaria italica
Seita.9G131700 2.0kb downstream 2.0kb downstream 8900 true scaffold_9: 8286667-8295566 Setaria italica
Seita.9G131700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8293567-8295566 Setaria italica
Seita.9G131700 5.0kb upstream 5.0kb upstream 11900 true scaffold_9: 8281667-8293566 Setaria italica
Seita.9G131700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8281667-8286666 Setaria italica
Seita.9G131700 5.0kb downstream 5.0kb downstream 11900 true scaffold_9: 8286667-8298566 Setaria italica
Seita.9G131700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8293567-8298566 Setaria italica
Seita.9G131700 10.0kb upstream 10.0kb upstream 16900 true scaffold_9: 8276667-8293566 Setaria italica
Seita.9G131700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8276667-8286666 Setaria italica
Seita.9G131700 10.0kb downstream 10.0kb downstream 16900 true scaffold_9: 8286667-8303566 Setaria italica
Seita.9G131700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8293567-8303566 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187389 5267 Panicoideae View MSA
124572391 5269 Grass View MSA
122041786 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.209        
cufflinks 4.29        
cufflinks 2.902       Low
cufflinks 3.414        
cufflinks 3.139       Low
cufflinks 4.597        
cufflinks 4.58        
cufflinks 2.374       Low
cufflinks 2.803       Low
cufflinks 4.548        
cufflinks 3.873        
cufflinks 7.132       High
cufflinks 4.879        
cufflinks 4.051        
cufflinks 4.122        
cufflinks 6.123       High
cufflinks 4.153        
cufflinks 6.607       High
cufflinks 5.006        
cufflinks 3.768        

0 Strain