Gene : Seita.9G137400 S. italica v2.2
Defline:  (1 of 1) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  1374
Name:  ? Seita.9G137400 Secondary Identifier:  ? PAC:32691036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G137400 0.5kb upstream 0.5kb upstream 4258 true scaffold_9: 8716932-8721189 Setaria italica
Seita.9G137400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8720690-8721189 Setaria italica
Seita.9G137400 0.5kb downstream 0.5kb downstream 4258 true scaffold_9: 8716432-8720689 Setaria italica
Seita.9G137400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8716432-8716931 Setaria italica
Seita.9G137400 1.0kb upstream 1.0kb upstream 4758 true scaffold_9: 8716932-8721689 Setaria italica
Seita.9G137400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8720690-8721689 Setaria italica
Seita.9G137400 1.0kb downstream 1.0kb downstream 4758 true scaffold_9: 8715932-8720689 Setaria italica
Seita.9G137400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8715932-8716931 Setaria italica
Seita.9G137400 2.0kb upstream 2.0kb upstream 5758 true scaffold_9: 8716932-8722689 Setaria italica
Seita.9G137400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8720690-8722689 Setaria italica
Seita.9G137400 2.0kb downstream 2.0kb downstream 5758 true scaffold_9: 8714932-8720689 Setaria italica
Seita.9G137400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8714932-8716931 Setaria italica
Seita.9G137400 5.0kb upstream 5.0kb upstream 8758 true scaffold_9: 8716932-8725689 Setaria italica
Seita.9G137400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8720690-8725689 Setaria italica
Seita.9G137400 5.0kb downstream 5.0kb downstream 8758 true scaffold_9: 8711932-8720689 Setaria italica
Seita.9G137400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8711932-8716931 Setaria italica
Seita.9G137400 10.0kb upstream 10.0kb upstream 13758 true scaffold_9: 8716932-8730689 Setaria italica
Seita.9G137400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8720690-8730689 Setaria italica
Seita.9G137400 10.0kb downstream 10.0kb downstream 13758 true scaffold_9: 8706932-8720689 Setaria italica
Seita.9G137400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8706932-8716931 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199752 5267 Panicoideae View MSA
124573779 5269 Grass View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.607        
cufflinks 2.414        
cufflinks 2.503        
cufflinks 2.732        
cufflinks 7.67        
cufflinks 2.677        
cufflinks 8.136        
cufflinks 13.35       High
cufflinks 13.06     High High
cufflinks 4.037        
cufflinks 2.253        
cufflinks 0.053     Low Low
cufflinks 0.134     Low Low
cufflinks 3.466        
cufflinks 0.122       Low
cufflinks 5.125        
cufflinks 0.171       Low
cufflinks 1.226        
cufflinks 3.369        
cufflinks 0.114     Low Low

0 Strain