Gene : Seita.9G142600 S. italica v2.2
Defline:  (1 of 1) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  1426
Name:  ? Seita.9G142600 Secondary Identifier:  ? PAC:32691456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G142600 0.5kb upstream 0.5kb upstream 3362 true scaffold_9: 9153934-9157295 Setaria italica
Seita.9G142600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9156796-9157295 Setaria italica
Seita.9G142600 0.5kb downstream 0.5kb downstream 3362 true scaffold_9: 9153434-9156795 Setaria italica
Seita.9G142600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9153434-9153933 Setaria italica
Seita.9G142600 1.0kb upstream 1.0kb upstream 3862 true scaffold_9: 9153934-9157795 Setaria italica
Seita.9G142600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9156796-9157795 Setaria italica
Seita.9G142600 1.0kb downstream 1.0kb downstream 3862 true scaffold_9: 9152934-9156795 Setaria italica
Seita.9G142600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9152934-9153933 Setaria italica
Seita.9G142600 2.0kb upstream 2.0kb upstream 4862 true scaffold_9: 9153934-9158795 Setaria italica
Seita.9G142600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9156796-9158795 Setaria italica
Seita.9G142600 2.0kb downstream 2.0kb downstream 4862 true scaffold_9: 9151934-9156795 Setaria italica
Seita.9G142600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9151934-9153933 Setaria italica
Seita.9G142600 5.0kb upstream 5.0kb upstream 7862 true scaffold_9: 9153934-9161795 Setaria italica
Seita.9G142600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9156796-9161795 Setaria italica
Seita.9G142600 5.0kb downstream 5.0kb downstream 7862 true scaffold_9: 9148934-9156795 Setaria italica
Seita.9G142600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9148934-9153933 Setaria italica
Seita.9G142600 10.0kb upstream 10.0kb upstream 12862 true scaffold_9: 9153934-9166795 Setaria italica
Seita.9G142600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9156796-9166795 Setaria italica
Seita.9G142600 10.0kb downstream 10.0kb downstream 12862 true scaffold_9: 9143934-9156795 Setaria italica
Seita.9G142600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9143934-9153933 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179585 5267 Panicoideae View MSA
124572244 5269 Grass View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.074        
cufflinks 0.42        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.387        
cufflinks 0.454        
cufflinks 6.511       High
cufflinks 3.243        
cufflinks 6.749       High
cufflinks 3.871        
cufflinks 5.426       High
cufflinks 0.754        
cufflinks 2.062        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.053        
cufflinks 1.11        
cufflinks 1.156        
cufflinks 0.402        
cufflinks 0.03     Low Low
cufflinks 1.796        

0 Strain