Gene : Seita.9G153800 S. italica v2.2
Defline:  (1 of 2) PTHR23115:SF13 - ELONGATION FACTOR TU GTP-BINDING DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1538
Name:  ? Seita.9G153800 Secondary Identifier:  ? PAC:32693168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G153800 0.5kb upstream 0.5kb upstream 6055 true scaffold_9: 10029347-10035401 Setaria italica
Seita.9G153800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10034902-10035401 Setaria italica
Seita.9G153800 0.5kb downstream 0.5kb downstream 6055 true scaffold_9: 10028847-10034901 Setaria italica
Seita.9G153800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10028847-10029346 Setaria italica
Seita.9G153800 1.0kb upstream 1.0kb upstream 6555 true scaffold_9: 10029347-10035901 Setaria italica
Seita.9G153800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10034902-10035901 Setaria italica
Seita.9G153800 1.0kb downstream 1.0kb downstream 6555 true scaffold_9: 10028347-10034901 Setaria italica
Seita.9G153800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10028347-10029346 Setaria italica
Seita.9G153800 2.0kb upstream 2.0kb upstream 7555 true scaffold_9: 10029347-10036901 Setaria italica
Seita.9G153800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10034902-10036901 Setaria italica
Seita.9G153800 2.0kb downstream 2.0kb downstream 7555 true scaffold_9: 10027347-10034901 Setaria italica
Seita.9G153800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10027347-10029346 Setaria italica
Seita.9G153800 5.0kb upstream 5.0kb upstream 10555 true scaffold_9: 10029347-10039901 Setaria italica
Seita.9G153800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10034902-10039901 Setaria italica
Seita.9G153800 5.0kb downstream 5.0kb downstream 10555 true scaffold_9: 10024347-10034901 Setaria italica
Seita.9G153800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10024347-10029346 Setaria italica
Seita.9G153800 10.0kb upstream 10.0kb upstream 15555 true scaffold_9: 10029347-10044901 Setaria italica
Seita.9G153800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10034902-10044901 Setaria italica
Seita.9G153800 10.0kb downstream 10.0kb downstream 15555 true scaffold_9: 10019347-10034901 Setaria italica
Seita.9G153800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10019347-10029346 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026464 5273 Angiosperm View MSA
122194827 5267 Panicoideae View MSA
124574676 5269 Grass View MSA
121346138 5274 Embryophyte View MSA
123424452 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.172        
cufflinks 5.49        
cufflinks 3.233        
cufflinks 2.288       Low
cufflinks 2.753        
cufflinks 5.129        
cufflinks 3.317        
cufflinks 2.754        
cufflinks 2.676       Low
cufflinks 3.904        
cufflinks 11.192       High
cufflinks 4.982        
cufflinks 3.29        
cufflinks 2.927        
cufflinks 4.672        
cufflinks 3.919        
cufflinks 4.183        
cufflinks 9.362       High
cufflinks 4.14        
cufflinks 4.07        

0 Strain