Gene : Seita.9G165900 S. italica v2.2
Genomic Order:  1659 Name:  ? Seita.9G165900
Secondary Identifier:  ? PAC:32688632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G165900 0.5kb upstream 0.5kb upstream 4014 true scaffold_9: 11209770-11213783 Setaria italica
Seita.9G165900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 11209770-11210269 Setaria italica
Seita.9G165900 0.5kb downstream 0.5kb downstream 4014 true scaffold_9: 11210270-11214283 Setaria italica
Seita.9G165900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 11213784-11214283 Setaria italica
Seita.9G165900 1.0kb upstream 1.0kb upstream 4514 true scaffold_9: 11209270-11213783 Setaria italica
Seita.9G165900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 11209270-11210269 Setaria italica
Seita.9G165900 1.0kb downstream 1.0kb downstream 4514 true scaffold_9: 11210270-11214783 Setaria italica
Seita.9G165900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 11213784-11214783 Setaria italica
Seita.9G165900 2.0kb upstream 2.0kb upstream 5514 true scaffold_9: 11208270-11213783 Setaria italica
Seita.9G165900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 11208270-11210269 Setaria italica
Seita.9G165900 2.0kb downstream 2.0kb downstream 5514 true scaffold_9: 11210270-11215783 Setaria italica
Seita.9G165900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 11213784-11215783 Setaria italica
Seita.9G165900 5.0kb upstream 5.0kb upstream 8514 true scaffold_9: 11205270-11213783 Setaria italica
Seita.9G165900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 11205270-11210269 Setaria italica
Seita.9G165900 5.0kb downstream 5.0kb downstream 8514 true scaffold_9: 11210270-11218783 Setaria italica
Seita.9G165900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 11213784-11218783 Setaria italica
Seita.9G165900 10.0kb upstream 10.0kb upstream 13514 true scaffold_9: 11200270-11213783 Setaria italica
Seita.9G165900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 11200270-11210269 Setaria italica
Seita.9G165900 10.0kb downstream 10.0kb downstream 13514 true scaffold_9: 11210270-11223783 Setaria italica
Seita.9G165900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 11213784-11223783 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196717 5267 Panicoideae View MSA
124588840 5269 Grass View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.289        
cufflinks 0.382       High
cufflinks 0.258        
cufflinks 0.197        
cufflinks 0.159       Low
cufflinks 0.429       High
cufflinks 0.196        
cufflinks 0.334        
cufflinks 0.242        
cufflinks 0.464       High
cufflinks 0.275        
cufflinks 0.286        
cufflinks 0.147     Low Low
cufflinks 0.259        
cufflinks 0.226        
cufflinks 0.306        
cufflinks 0.29        
cufflinks 0.425       High
cufflinks 0.168       Low
cufflinks 0.263        

0 Strain