Gene : Seita.9G102600 S. italica v2.2
Defline:  (1 of 1) PTHR13516:SF3 - ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  1026
Name:  ? Seita.9G102600 Secondary Identifier:  ? PAC:32691495
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G102600 0.5kb upstream 0.5kb upstream 3202 true scaffold_9: 6214874-6218075 Setaria italica
Seita.9G102600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6214874-6215373 Setaria italica
Seita.9G102600 0.5kb downstream 0.5kb downstream 3202 true scaffold_9: 6215374-6218575 Setaria italica
Seita.9G102600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6218076-6218575 Setaria italica
Seita.9G102600 1.0kb upstream 1.0kb upstream 3702 true scaffold_9: 6214374-6218075 Setaria italica
Seita.9G102600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6214374-6215373 Setaria italica
Seita.9G102600 1.0kb downstream 1.0kb downstream 3702 true scaffold_9: 6215374-6219075 Setaria italica
Seita.9G102600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6218076-6219075 Setaria italica
Seita.9G102600 2.0kb upstream 2.0kb upstream 4702 true scaffold_9: 6213374-6218075 Setaria italica
Seita.9G102600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6213374-6215373 Setaria italica
Seita.9G102600 2.0kb downstream 2.0kb downstream 4702 true scaffold_9: 6215374-6220075 Setaria italica
Seita.9G102600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6218076-6220075 Setaria italica
Seita.9G102600 5.0kb upstream 5.0kb upstream 7702 true scaffold_9: 6210374-6218075 Setaria italica
Seita.9G102600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6210374-6215373 Setaria italica
Seita.9G102600 5.0kb downstream 5.0kb downstream 7702 true scaffold_9: 6215374-6223075 Setaria italica
Seita.9G102600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6218076-6223075 Setaria italica
Seita.9G102600 10.0kb upstream 10.0kb upstream 12702 true scaffold_9: 6205374-6218075 Setaria italica
Seita.9G102600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6205374-6215373 Setaria italica
Seita.9G102600 10.0kb downstream 10.0kb downstream 12702 true scaffold_9: 6215374-6228075 Setaria italica
Seita.9G102600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6218076-6228075 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187390 5267 Panicoideae View MSA
124586251 5269 Grass View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.549     High  
cufflinks 33.265     High High
cufflinks 8.002       Low
cufflinks 6.157       Low
cufflinks 9.788       Low
cufflinks 30.362     High High
cufflinks 19.005     High  
cufflinks 21.395     High  
cufflinks 26.837     High  
cufflinks 18.082     High  
cufflinks 26.503     High  
cufflinks 26.637     High  
cufflinks 12.807        
cufflinks 16.121     High  
cufflinks 23.06     High  
cufflinks 14.889     High  
cufflinks 27.671     High  
cufflinks 24.089     High  
cufflinks 7.015       Low
cufflinks 24.71     High  

0 Strain