Gene : Seita.9G106400 S. italica v2.2
Defline:  (1 of 1) 3.6.3.35 - Manganese-transporting ATPase / ABC-type manganese permease complex Genomic Order:  1064
Name:  ? Seita.9G106400 Secondary Identifier:  ? PAC:32690697
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G106400 0.5kb upstream 0.5kb upstream 18460 true scaffold_9: 6412598-6431057 Setaria italica
Seita.9G106400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6412598-6413097 Setaria italica
Seita.9G106400 0.5kb downstream 0.5kb downstream 18460 true scaffold_9: 6413098-6431557 Setaria italica
Seita.9G106400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6431058-6431557 Setaria italica
Seita.9G106400 1.0kb upstream 1.0kb upstream 18960 true scaffold_9: 6412098-6431057 Setaria italica
Seita.9G106400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6412098-6413097 Setaria italica
Seita.9G106400 1.0kb downstream 1.0kb downstream 18960 true scaffold_9: 6413098-6432057 Setaria italica
Seita.9G106400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6431058-6432057 Setaria italica
Seita.9G106400 2.0kb upstream 2.0kb upstream 19960 true scaffold_9: 6411098-6431057 Setaria italica
Seita.9G106400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6411098-6413097 Setaria italica
Seita.9G106400 2.0kb downstream 2.0kb downstream 19960 true scaffold_9: 6413098-6433057 Setaria italica
Seita.9G106400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6431058-6433057 Setaria italica
Seita.9G106400 5.0kb upstream 5.0kb upstream 22960 true scaffold_9: 6408098-6431057 Setaria italica
Seita.9G106400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6408098-6413097 Setaria italica
Seita.9G106400 5.0kb downstream 5.0kb downstream 22960 true scaffold_9: 6413098-6436057 Setaria italica
Seita.9G106400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6431058-6436057 Setaria italica
Seita.9G106400 10.0kb upstream 10.0kb upstream 27960 true scaffold_9: 6403098-6431057 Setaria italica
Seita.9G106400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6403098-6413097 Setaria italica
Seita.9G106400 10.0kb downstream 10.0kb downstream 27960 true scaffold_9: 6413098-6441057 Setaria italica
Seita.9G106400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6431058-6441057 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189978 5267 Panicoideae View MSA
124572570 5269 Grass View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.438       High
cufflinks 4.995       High
cufflinks 2.886        
cufflinks 2.324       Low
cufflinks 1.897       Low
cufflinks 4.96       High
cufflinks 3.922        
cufflinks 3.134        
cufflinks 2.875        
cufflinks 2.875        
cufflinks 4.295        
cufflinks 3.496        
cufflinks 3.156        
cufflinks 2.198       Low
cufflinks 3.61        
cufflinks 4.103        
cufflinks 3.54        
cufflinks 3.686        
cufflinks 2.321       Low
cufflinks 3.752        

0 Strain