Gene : Seita.9G108900 S. italica v2.2
Defline:  (1 of 1) PTHR10229:SF0 - GTP-BINDING PROTEIN 6-RELATED Genomic Order:  1089
Name:  ? Seita.9G108900 Secondary Identifier:  ? PAC:32690692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G108900 0.5kb upstream 0.5kb upstream 8151 true scaffold_9: 6599779-6607929 Setaria italica
Seita.9G108900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6599779-6600278 Setaria italica
Seita.9G108900 0.5kb downstream 0.5kb downstream 8151 true scaffold_9: 6600279-6608429 Setaria italica
Seita.9G108900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6607930-6608429 Setaria italica
Seita.9G108900 1.0kb upstream 1.0kb upstream 8651 true scaffold_9: 6599279-6607929 Setaria italica
Seita.9G108900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6599279-6600278 Setaria italica
Seita.9G108900 1.0kb downstream 1.0kb downstream 8651 true scaffold_9: 6600279-6608929 Setaria italica
Seita.9G108900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6607930-6608929 Setaria italica
Seita.9G108900 2.0kb upstream 2.0kb upstream 9651 true scaffold_9: 6598279-6607929 Setaria italica
Seita.9G108900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6598279-6600278 Setaria italica
Seita.9G108900 2.0kb downstream 2.0kb downstream 9651 true scaffold_9: 6600279-6609929 Setaria italica
Seita.9G108900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6607930-6609929 Setaria italica
Seita.9G108900 5.0kb upstream 5.0kb upstream 12651 true scaffold_9: 6595279-6607929 Setaria italica
Seita.9G108900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6595279-6600278 Setaria italica
Seita.9G108900 5.0kb downstream 5.0kb downstream 12651 true scaffold_9: 6600279-6612929 Setaria italica
Seita.9G108900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6607930-6612929 Setaria italica
Seita.9G108900 10.0kb upstream 10.0kb upstream 17651 true scaffold_9: 6590279-6607929 Setaria italica
Seita.9G108900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6590279-6600278 Setaria italica
Seita.9G108900 10.0kb downstream 10.0kb downstream 17651 true scaffold_9: 6600279-6617929 Setaria italica
Seita.9G108900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6607930-6617929 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189982 5267 Panicoideae View MSA
124573999 5269 Grass View MSA
122043744 5273 Angiosperm View MSA
121346243 5274 Embryophyte View MSA
123427709 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.786        
cufflinks 0.799        
cufflinks 0.402       Low
cufflinks 0.369       Low
cufflinks 0.296       Low
cufflinks 0.674        
cufflinks 0.657        
cufflinks 0.551        
cufflinks 0.408       Low
cufflinks 0.76        
cufflinks 0.676        
cufflinks 0.752        
cufflinks 0.376       Low
cufflinks 0.479        
cufflinks 0.733        
cufflinks 0.85       High
cufflinks 0.753        
cufflinks 1.089       High
cufflinks 0.355       Low
cufflinks 0.655        

0 Strain