Gene : Seita.9G107500 S. italica v2.2
Defline:  (1 of 138) PF07762 - Protein of unknown function (DUF1618) Genomic Order:  1075
Name:  ? Seita.9G107500 Secondary Identifier:  ? PAC:32692698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G107500 0.5kb upstream 0.5kb upstream 1648 true scaffold_9: 6482971-6484618 Setaria italica
Seita.9G107500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6482971-6483470 Setaria italica
Seita.9G107500 0.5kb downstream 0.5kb downstream 1648 true scaffold_9: 6483471-6485118 Setaria italica
Seita.9G107500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6484619-6485118 Setaria italica
Seita.9G107500 1.0kb upstream 1.0kb upstream 2148 true scaffold_9: 6482471-6484618 Setaria italica
Seita.9G107500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6482471-6483470 Setaria italica
Seita.9G107500 1.0kb downstream 1.0kb downstream 2148 true scaffold_9: 6483471-6485618 Setaria italica
Seita.9G107500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6484619-6485618 Setaria italica
Seita.9G107500 2.0kb upstream 2.0kb upstream 3148 true scaffold_9: 6481471-6484618 Setaria italica
Seita.9G107500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6481471-6483470 Setaria italica
Seita.9G107500 2.0kb downstream 2.0kb downstream 3148 true scaffold_9: 6483471-6486618 Setaria italica
Seita.9G107500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6484619-6486618 Setaria italica
Seita.9G107500 5.0kb upstream 5.0kb upstream 6148 true scaffold_9: 6478471-6484618 Setaria italica
Seita.9G107500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6478471-6483470 Setaria italica
Seita.9G107500 5.0kb downstream 5.0kb downstream 6148 true scaffold_9: 6483471-6489618 Setaria italica
Seita.9G107500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6484619-6489618 Setaria italica
Seita.9G107500 10.0kb upstream 10.0kb upstream 11148 true scaffold_9: 6473471-6484618 Setaria italica
Seita.9G107500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6473471-6483470 Setaria italica
Seita.9G107500 10.0kb downstream 10.0kb downstream 11148 true scaffold_9: 6483471-6494618 Setaria italica
Seita.9G107500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6484619-6494618 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122117683 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  

0 Strain