Gene : Seita.9G109500 S. italica v2.2
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  1095
Name:  ? Seita.9G109500 Secondary Identifier:  ? PAC:32691973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G109500 0.5kb upstream 0.5kb upstream 10074 true scaffold_9: 6676797-6686870 Setaria italica
Seita.9G109500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6676797-6677296 Setaria italica
Seita.9G109500 0.5kb downstream 0.5kb downstream 10074 true scaffold_9: 6677297-6687370 Setaria italica
Seita.9G109500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6686871-6687370 Setaria italica
Seita.9G109500 1.0kb upstream 1.0kb upstream 10574 true scaffold_9: 6676297-6686870 Setaria italica
Seita.9G109500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6676297-6677296 Setaria italica
Seita.9G109500 1.0kb downstream 1.0kb downstream 10574 true scaffold_9: 6677297-6687870 Setaria italica
Seita.9G109500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6686871-6687870 Setaria italica
Seita.9G109500 2.0kb upstream 2.0kb upstream 11574 true scaffold_9: 6675297-6686870 Setaria italica
Seita.9G109500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6675297-6677296 Setaria italica
Seita.9G109500 2.0kb downstream 2.0kb downstream 11574 true scaffold_9: 6677297-6688870 Setaria italica
Seita.9G109500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6686871-6688870 Setaria italica
Seita.9G109500 5.0kb upstream 5.0kb upstream 14574 true scaffold_9: 6672297-6686870 Setaria italica
Seita.9G109500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6672297-6677296 Setaria italica
Seita.9G109500 5.0kb downstream 5.0kb downstream 14574 true scaffold_9: 6677297-6691870 Setaria italica
Seita.9G109500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6686871-6691870 Setaria italica
Seita.9G109500 10.0kb upstream 10.0kb upstream 19574 true scaffold_9: 6667297-6686870 Setaria italica
Seita.9G109500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6667297-6677296 Setaria italica
Seita.9G109500 10.0kb downstream 10.0kb downstream 19574 true scaffold_9: 6677297-6696870 Setaria italica
Seita.9G109500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6686871-6696870 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188661 5267 Panicoideae View MSA
124583154 5269 Grass View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.295       High
cufflinks 2.104       High
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 3.399       High
cufflinks 0.238        
cufflinks 0.48        
cufflinks 0.001     Low Low
cufflinks 2.469       High
cufflinks 1.853       High
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.898        
cufflinks 0.031     Low  
cufflinks 0.586        
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain