Gene : Seita.9G111800 S. italica v2.2
Defline:  (1 of 1) PTHR11926//PTHR11926:SF281 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1118
Name:  ? Seita.9G111800 Secondary Identifier:  ? PAC:32686992
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5390 Setaria italica pathologic  
Sitalica PWY-7055 Setaria italica pathologic  
Sitalica PWY-7140 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G111800 0.5kb upstream 0.5kb upstream 1925 true scaffold_9: 6878587-6880511 Setaria italica
Seita.9G111800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6878587-6879086 Setaria italica
Seita.9G111800 0.5kb downstream 0.5kb downstream 1925 true scaffold_9: 6879087-6881011 Setaria italica
Seita.9G111800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6880512-6881011 Setaria italica
Seita.9G111800 1.0kb upstream 1.0kb upstream 2425 true scaffold_9: 6878087-6880511 Setaria italica
Seita.9G111800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6878087-6879086 Setaria italica
Seita.9G111800 1.0kb downstream 1.0kb downstream 2425 true scaffold_9: 6879087-6881511 Setaria italica
Seita.9G111800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6880512-6881511 Setaria italica
Seita.9G111800 2.0kb upstream 2.0kb upstream 3425 true scaffold_9: 6877087-6880511 Setaria italica
Seita.9G111800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6877087-6879086 Setaria italica
Seita.9G111800 2.0kb downstream 2.0kb downstream 3425 true scaffold_9: 6879087-6882511 Setaria italica
Seita.9G111800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6880512-6882511 Setaria italica
Seita.9G111800 5.0kb upstream 5.0kb upstream 6425 true scaffold_9: 6874087-6880511 Setaria italica
Seita.9G111800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6874087-6879086 Setaria italica
Seita.9G111800 5.0kb downstream 5.0kb downstream 6425 true scaffold_9: 6879087-6885511 Setaria italica
Seita.9G111800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6880512-6885511 Setaria italica
Seita.9G111800 10.0kb upstream 10.0kb upstream 11425 true scaffold_9: 6869087-6880511 Setaria italica
Seita.9G111800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6869087-6879086 Setaria italica
Seita.9G111800 10.0kb downstream 10.0kb downstream 11425 true scaffold_9: 6879087-6890511 Setaria italica
Seita.9G111800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6880512-6890511 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992956 5273 Angiosperm View MSA
122186687 5267 Panicoideae View MSA
124573610 5269 Grass View MSA
121263274 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.024     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  

0 Strain