Gene : Seita.9G112300 S. italica v2.2
Defline:  (1 of 2) PTHR10652 - ADENYLYL CYCLASE-ASSOCIATED PROTEIN Genomic Order:  1123
Name:  ? Seita.9G112300 Secondary Identifier:  ? PAC:32691731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G112300 0.5kb upstream 0.5kb upstream 6102 true scaffold_9: 6912370-6918471 Setaria italica
Seita.9G112300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6912370-6912869 Setaria italica
Seita.9G112300 0.5kb downstream 0.5kb downstream 6102 true scaffold_9: 6912870-6918971 Setaria italica
Seita.9G112300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6918472-6918971 Setaria italica
Seita.9G112300 1.0kb upstream 1.0kb upstream 6602 true scaffold_9: 6911870-6918471 Setaria italica
Seita.9G112300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6911870-6912869 Setaria italica
Seita.9G112300 1.0kb downstream 1.0kb downstream 6602 true scaffold_9: 6912870-6919471 Setaria italica
Seita.9G112300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6918472-6919471 Setaria italica
Seita.9G112300 2.0kb upstream 2.0kb upstream 7602 true scaffold_9: 6910870-6918471 Setaria italica
Seita.9G112300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6910870-6912869 Setaria italica
Seita.9G112300 2.0kb downstream 2.0kb downstream 7602 true scaffold_9: 6912870-6920471 Setaria italica
Seita.9G112300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6918472-6920471 Setaria italica
Seita.9G112300 5.0kb upstream 5.0kb upstream 10602 true scaffold_9: 6907870-6918471 Setaria italica
Seita.9G112300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6907870-6912869 Setaria italica
Seita.9G112300 5.0kb downstream 5.0kb downstream 10602 true scaffold_9: 6912870-6923471 Setaria italica
Seita.9G112300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6918472-6923471 Setaria italica
Seita.9G112300 10.0kb upstream 10.0kb upstream 15602 true scaffold_9: 6902870-6918471 Setaria italica
Seita.9G112300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6902870-6912869 Setaria italica
Seita.9G112300 10.0kb downstream 10.0kb downstream 15602 true scaffold_9: 6912870-6928471 Setaria italica
Seita.9G112300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6918472-6928471 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196231 5267 Panicoideae View MSA
124575031 5269 Grass View MSA
122047281 5273 Angiosperm View MSA
121343811 5274 Embryophyte View MSA
123426787 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.236     High  
cufflinks 16.136     High  
cufflinks 2.197       Low
cufflinks 2.255       Low
cufflinks 3.179       Low
cufflinks 15.561     High  
cufflinks 11.417        
cufflinks 8.775        
cufflinks 8.473        
cufflinks 16.806     High  
cufflinks 17.778     High  
cufflinks 12.366        
cufflinks 15.668     High  
cufflinks 3.709       Low
cufflinks 15.199     High  
cufflinks 8.028        
cufflinks 13.363        
cufflinks 6.561        
cufflinks 7.113        
cufflinks 16.589     High  

0 Strain