Gene : Seita.9G117600 S. italica v2.2
Defline:  (1 of 1) PTHR10997:SF8 - EXPORTIN-2 Genomic Order:  1176
Name:  ? Seita.9G117600 Secondary Identifier:  ? PAC:32691000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G117600 0.5kb upstream 0.5kb upstream 6165 true scaffold_9: 7287798-7293962 Setaria italica
Seita.9G117600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7293463-7293962 Setaria italica
Seita.9G117600 0.5kb downstream 0.5kb downstream 6165 true scaffold_9: 7287298-7293462 Setaria italica
Seita.9G117600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7287298-7287797 Setaria italica
Seita.9G117600 1.0kb upstream 1.0kb upstream 6665 true scaffold_9: 7287798-7294462 Setaria italica
Seita.9G117600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7293463-7294462 Setaria italica
Seita.9G117600 1.0kb downstream 1.0kb downstream 6665 true scaffold_9: 7286798-7293462 Setaria italica
Seita.9G117600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7286798-7287797 Setaria italica
Seita.9G117600 2.0kb upstream 2.0kb upstream 7665 true scaffold_9: 7287798-7295462 Setaria italica
Seita.9G117600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7293463-7295462 Setaria italica
Seita.9G117600 2.0kb downstream 2.0kb downstream 7665 true scaffold_9: 7285798-7293462 Setaria italica
Seita.9G117600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7285798-7287797 Setaria italica
Seita.9G117600 5.0kb upstream 5.0kb upstream 10665 true scaffold_9: 7287798-7298462 Setaria italica
Seita.9G117600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7293463-7298462 Setaria italica
Seita.9G117600 5.0kb downstream 5.0kb downstream 10665 true scaffold_9: 7282798-7293462 Setaria italica
Seita.9G117600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7282798-7287797 Setaria italica
Seita.9G117600 10.0kb upstream 10.0kb upstream 15665 true scaffold_9: 7287798-7303462 Setaria italica
Seita.9G117600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7293463-7303462 Setaria italica
Seita.9G117600 10.0kb downstream 10.0kb downstream 15665 true scaffold_9: 7277798-7293462 Setaria italica
Seita.9G117600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7277798-7287797 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184805 5267 Panicoideae View MSA
124586600 5269 Grass View MSA
122046448 5273 Angiosperm View MSA
121344588 5274 Embryophyte View MSA
123424324 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.803        
cufflinks 15.605     High High
cufflinks 5.705       Low
cufflinks 3.669       Low
cufflinks 5.787       Low
cufflinks 12.554        
cufflinks 9.602        
cufflinks 10.959        
cufflinks 9.138        
cufflinks 12.124        
cufflinks 16.615     High High
cufflinks 10.819        
cufflinks 9.436        
cufflinks 7.677        
cufflinks 15.569     High High
cufflinks 7.335        
cufflinks 13.077        
cufflinks 9.788        
cufflinks 4.94       Low
cufflinks 14.381        

0 Strain