Gene : Seita.9G118800 S. italica v2.2
Defline:  (1 of 1) PTHR23111:SF23 - ZINC FINGER (RAN-BINDING) DOMAIN-CONTAINING PROTEIN Genomic Order:  1188
Name:  ? Seita.9G118800 Secondary Identifier:  ? PAC:32690866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G118800 0.5kb upstream 0.5kb upstream 4003 true scaffold_9: 7362221-7366223 Setaria italica
Seita.9G118800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7365724-7366223 Setaria italica
Seita.9G118800 0.5kb downstream 0.5kb downstream 4003 true scaffold_9: 7361721-7365723 Setaria italica
Seita.9G118800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7361721-7362220 Setaria italica
Seita.9G118800 1.0kb upstream 1.0kb upstream 4503 true scaffold_9: 7362221-7366723 Setaria italica
Seita.9G118800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7365724-7366723 Setaria italica
Seita.9G118800 1.0kb downstream 1.0kb downstream 4503 true scaffold_9: 7361221-7365723 Setaria italica
Seita.9G118800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7361221-7362220 Setaria italica
Seita.9G118800 2.0kb upstream 2.0kb upstream 5503 true scaffold_9: 7362221-7367723 Setaria italica
Seita.9G118800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7365724-7367723 Setaria italica
Seita.9G118800 2.0kb downstream 2.0kb downstream 5503 true scaffold_9: 7360221-7365723 Setaria italica
Seita.9G118800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7360221-7362220 Setaria italica
Seita.9G118800 5.0kb upstream 5.0kb upstream 8503 true scaffold_9: 7362221-7370723 Setaria italica
Seita.9G118800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7365724-7370723 Setaria italica
Seita.9G118800 5.0kb downstream 5.0kb downstream 8503 true scaffold_9: 7357221-7365723 Setaria italica
Seita.9G118800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7357221-7362220 Setaria italica
Seita.9G118800 10.0kb upstream 10.0kb upstream 13503 true scaffold_9: 7362221-7375723 Setaria italica
Seita.9G118800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7365724-7375723 Setaria italica
Seita.9G118800 10.0kb downstream 10.0kb downstream 13503 true scaffold_9: 7352221-7365723 Setaria italica
Seita.9G118800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7352221-7362220 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188045 5267 Panicoideae View MSA
124573459 5269 Grass View MSA
122045549 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.641        
cufflinks 3.033       High
cufflinks 1.242        
cufflinks 0.777       Low
cufflinks 0.889       Low
cufflinks 2.733       High
cufflinks 1.408        
cufflinks 2.211        
cufflinks 1.742        
cufflinks 1.659        
cufflinks 1.278        
cufflinks 1.789        
cufflinks 1.037       Low
cufflinks 2.473       High
cufflinks 1.607        
cufflinks 1.802        
cufflinks 2.385       High
cufflinks 1.555        
cufflinks 0.834       Low
cufflinks 1.927        

0 Strain