Gene : Seita.9G122000 S. italica v2.2
Defline:  (1 of 1) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor) / Steroid 5-alpha-reductase Genomic Order:  1220
Name:  ? Seita.9G122000 Secondary Identifier:  ? PAC:32688389
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G122000 0.5kb upstream 0.5kb upstream 4476 true scaffold_9: 7550758-7555233 Setaria italica
Seita.9G122000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7554734-7555233 Setaria italica
Seita.9G122000 0.5kb downstream 0.5kb downstream 4476 true scaffold_9: 7550258-7554733 Setaria italica
Seita.9G122000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7550258-7550757 Setaria italica
Seita.9G122000 1.0kb upstream 1.0kb upstream 4976 true scaffold_9: 7550758-7555733 Setaria italica
Seita.9G122000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7554734-7555733 Setaria italica
Seita.9G122000 1.0kb downstream 1.0kb downstream 4976 true scaffold_9: 7549758-7554733 Setaria italica
Seita.9G122000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7549758-7550757 Setaria italica
Seita.9G122000 2.0kb upstream 2.0kb upstream 5976 true scaffold_9: 7550758-7556733 Setaria italica
Seita.9G122000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7554734-7556733 Setaria italica
Seita.9G122000 2.0kb downstream 2.0kb downstream 5976 true scaffold_9: 7548758-7554733 Setaria italica
Seita.9G122000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7548758-7550757 Setaria italica
Seita.9G122000 5.0kb upstream 5.0kb upstream 8976 true scaffold_9: 7550758-7559733 Setaria italica
Seita.9G122000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7554734-7559733 Setaria italica
Seita.9G122000 5.0kb downstream 5.0kb downstream 8976 true scaffold_9: 7545758-7554733 Setaria italica
Seita.9G122000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7545758-7550757 Setaria italica
Seita.9G122000 10.0kb upstream 10.0kb upstream 13976 true scaffold_9: 7550758-7564733 Setaria italica
Seita.9G122000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7554734-7564733 Setaria italica
Seita.9G122000 10.0kb downstream 10.0kb downstream 13976 true scaffold_9: 7540758-7554733 Setaria italica
Seita.9G122000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7540758-7550757 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181328 5267 Panicoideae View MSA
124579808 5269 Grass View MSA
122047658 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121351590 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.499        
cufflinks 3.608        
cufflinks 3.251        
cufflinks 3.336        
cufflinks 5.599        
cufflinks 3.495        
cufflinks 7.012       High
cufflinks 4.364        
cufflinks 6.062        
cufflinks 0.85       Low
cufflinks 1.096       Low
cufflinks 1.049       Low
cufflinks 1.277        
cufflinks 4.676        
cufflinks 1.162       Low
cufflinks 9.775       High
cufflinks 1.029       Low
cufflinks 6.231       High
cufflinks 6.523       High
cufflinks 1.013       Low

0 Strain