Gene : Seita.9G213400 S. italica v2.2
Defline:  (1 of 1) PTHR14190//PTHR14190:SF11 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  2134
Name:  ? Seita.9G213400 Secondary Identifier:  ? PAC:32688223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G213400 0.5kb upstream 0.5kb upstream 10591 true scaffold_9: 15505907-15516497 Setaria italica
Seita.9G213400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 15515998-15516497 Setaria italica
Seita.9G213400 0.5kb downstream 0.5kb downstream 10591 true scaffold_9: 15505407-15515997 Setaria italica
Seita.9G213400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 15505407-15505906 Setaria italica
Seita.9G213400 1.0kb upstream 1.0kb upstream 11091 true scaffold_9: 15505907-15516997 Setaria italica
Seita.9G213400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15515998-15516997 Setaria italica
Seita.9G213400 1.0kb downstream 1.0kb downstream 11091 true scaffold_9: 15504907-15515997 Setaria italica
Seita.9G213400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 15504907-15505906 Setaria italica
Seita.9G213400 2.0kb upstream 2.0kb upstream 12091 true scaffold_9: 15505907-15517997 Setaria italica
Seita.9G213400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 15515998-15517997 Setaria italica
Seita.9G213400 2.0kb downstream 2.0kb downstream 12091 true scaffold_9: 15503907-15515997 Setaria italica
Seita.9G213400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 15503907-15505906 Setaria italica
Seita.9G213400 5.0kb upstream 5.0kb upstream 15091 true scaffold_9: 15505907-15520997 Setaria italica
Seita.9G213400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 15515998-15520997 Setaria italica
Seita.9G213400 5.0kb downstream 5.0kb downstream 15091 true scaffold_9: 15500907-15515997 Setaria italica
Seita.9G213400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 15500907-15505906 Setaria italica
Seita.9G213400 10.0kb upstream 10.0kb upstream 20091 true scaffold_9: 15505907-15525997 Setaria italica
Seita.9G213400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 15515998-15525997 Setaria italica
Seita.9G213400 10.0kb downstream 10.0kb downstream 20091 true scaffold_9: 15495907-15515997 Setaria italica
Seita.9G213400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 15495907-15505906 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175279 5267 Panicoideae View MSA
124569026 5269 Grass View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low  
cufflinks 0.077     Low High
cufflinks 0.02     Low  
cufflinks 0.028     Low  
cufflinks 0.011     Low Low
cufflinks 0.073     Low High
cufflinks 0.029     Low  
cufflinks 0.046     Low  
cufflinks 0.026     Low  
cufflinks 0.01     Low Low
cufflinks 0.041     Low  
cufflinks 0.027     Low  
cufflinks 0.027     Low  
cufflinks 0.01     Low Low
cufflinks 0.049     Low  
cufflinks 0.014     Low Low
cufflinks 0.045     Low  
cufflinks 0.013     Low Low
cufflinks 0.016     Low  
cufflinks 0.051     Low High

0 Strain