Gene : Seita.9G213200 S. italica v2.2
Defline:  (1 of 3) PTHR13140:SF384 - MYOSIN-2 Genomic Order:  2132
Name:  ? Seita.9G213200 Secondary Identifier:  ? PAC:32692499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G213200 0.5kb upstream 0.5kb upstream 10193 true scaffold_9: 15462500-15472692 Setaria italica
Seita.9G213200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 15472193-15472692 Setaria italica
Seita.9G213200 0.5kb downstream 0.5kb downstream 10193 true scaffold_9: 15462000-15472192 Setaria italica
Seita.9G213200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 15462000-15462499 Setaria italica
Seita.9G213200 1.0kb upstream 1.0kb upstream 10693 true scaffold_9: 15462500-15473192 Setaria italica
Seita.9G213200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15472193-15473192 Setaria italica
Seita.9G213200 1.0kb downstream 1.0kb downstream 10693 true scaffold_9: 15461500-15472192 Setaria italica
Seita.9G213200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 15461500-15462499 Setaria italica
Seita.9G213200 2.0kb upstream 2.0kb upstream 11693 true scaffold_9: 15462500-15474192 Setaria italica
Seita.9G213200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 15472193-15474192 Setaria italica
Seita.9G213200 2.0kb downstream 2.0kb downstream 11693 true scaffold_9: 15460500-15472192 Setaria italica
Seita.9G213200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 15460500-15462499 Setaria italica
Seita.9G213200 5.0kb upstream 5.0kb upstream 14693 true scaffold_9: 15462500-15477192 Setaria italica
Seita.9G213200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 15472193-15477192 Setaria italica
Seita.9G213200 5.0kb downstream 5.0kb downstream 14693 true scaffold_9: 15457500-15472192 Setaria italica
Seita.9G213200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 15457500-15462499 Setaria italica
Seita.9G213200 10.0kb upstream 10.0kb upstream 19693 true scaffold_9: 15462500-15482192 Setaria italica
Seita.9G213200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 15472193-15482192 Setaria italica
Seita.9G213200 10.0kb downstream 10.0kb downstream 19693 true scaffold_9: 15452500-15472192 Setaria italica
Seita.9G213200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 15452500-15462499 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182197 5267 Panicoideae View MSA
124584800 5269 Grass View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.865     High  
cufflinks 25.568     High High
cufflinks 7.013       Low
cufflinks 6.985       Low
cufflinks 7.613       Low
cufflinks 23.157     High High
cufflinks 16.36     High  
cufflinks 10.634        
cufflinks 9.656        
cufflinks 7.443       Low
cufflinks 16.457     High  
cufflinks 12.25        
cufflinks 11.874        
cufflinks 7.285       Low
cufflinks 14.317     High  
cufflinks 17.778     High  
cufflinks 11.672        
cufflinks 13.57     High  
cufflinks 8.402        
cufflinks 13.989        

0 Strain