Gene : Seita.9G215000 S. italica v2.2
Defline:  (1 of 1) PTHR19923 - WD40 REPEAT PROTEINPRL1/PRL2-RELATED Genomic Order:  2150
Name:  ? Seita.9G215000 Secondary Identifier:  ? PAC:32688177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G215000 0.5kb upstream 0.5kb upstream 8284 true scaffold_9: 15611518-15619801 Setaria italica
Seita.9G215000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 15611518-15612017 Setaria italica
Seita.9G215000 0.5kb downstream 0.5kb downstream 8284 true scaffold_9: 15612018-15620301 Setaria italica
Seita.9G215000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 15619802-15620301 Setaria italica
Seita.9G215000 1.0kb upstream 1.0kb upstream 8784 true scaffold_9: 15611018-15619801 Setaria italica
Seita.9G215000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15611018-15612017 Setaria italica
Seita.9G215000 1.0kb downstream 1.0kb downstream 8784 true scaffold_9: 15612018-15620801 Setaria italica
Seita.9G215000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 15619802-15620801 Setaria italica
Seita.9G215000 2.0kb upstream 2.0kb upstream 9784 true scaffold_9: 15610018-15619801 Setaria italica
Seita.9G215000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 15610018-15612017 Setaria italica
Seita.9G215000 2.0kb downstream 2.0kb downstream 9784 true scaffold_9: 15612018-15621801 Setaria italica
Seita.9G215000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 15619802-15621801 Setaria italica
Seita.9G215000 5.0kb upstream 5.0kb upstream 12784 true scaffold_9: 15607018-15619801 Setaria italica
Seita.9G215000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 15607018-15612017 Setaria italica
Seita.9G215000 5.0kb downstream 5.0kb downstream 12784 true scaffold_9: 15612018-15624801 Setaria italica
Seita.9G215000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 15619802-15624801 Setaria italica
Seita.9G215000 10.0kb upstream 10.0kb upstream 17784 true scaffold_9: 15602018-15619801 Setaria italica
Seita.9G215000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 15602018-15612017 Setaria italica
Seita.9G215000 10.0kb downstream 10.0kb downstream 17784 true scaffold_9: 15612018-15629801 Setaria italica
Seita.9G215000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 15619802-15629801 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178181 5267 Panicoideae View MSA
124573472 5269 Grass View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.427        
cufflinks 7.057        
cufflinks 5.252       Low
cufflinks 6.013        
cufflinks 5.958        
cufflinks 7.648       High
cufflinks 5.735        
cufflinks 8.437       High
cufflinks 6.766        
cufflinks 7.112        
cufflinks 5.676        
cufflinks 7.372        
cufflinks 6.691        
cufflinks 5.417       Low
cufflinks 6.417        
cufflinks 5.497        
cufflinks 7.892       High
cufflinks 6.473        
cufflinks 4.54       Low
cufflinks 8.032       High

0 Strain