Gene : Seita.9G221400 S. italica v2.2
Defline:  (1 of 1) PTHR23026 - NADPH NITROREDUCTASE Genomic Order:  2214
Name:  ? Seita.9G221400 Secondary Identifier:  ? PAC:32689016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G221400 0.5kb upstream 0.5kb upstream 5361 true scaffold_9: 16443701-16449061 Setaria italica
Seita.9G221400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16448562-16449061 Setaria italica
Seita.9G221400 0.5kb downstream 0.5kb downstream 5361 true scaffold_9: 16443201-16448561 Setaria italica
Seita.9G221400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 16443201-16443700 Setaria italica
Seita.9G221400 1.0kb upstream 1.0kb upstream 5861 true scaffold_9: 16443701-16449561 Setaria italica
Seita.9G221400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 16448562-16449561 Setaria italica
Seita.9G221400 1.0kb downstream 1.0kb downstream 5861 true scaffold_9: 16442701-16448561 Setaria italica
Seita.9G221400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 16442701-16443700 Setaria italica
Seita.9G221400 2.0kb upstream 2.0kb upstream 6861 true scaffold_9: 16443701-16450561 Setaria italica
Seita.9G221400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 16448562-16450561 Setaria italica
Seita.9G221400 2.0kb downstream 2.0kb downstream 6861 true scaffold_9: 16441701-16448561 Setaria italica
Seita.9G221400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 16441701-16443700 Setaria italica
Seita.9G221400 5.0kb upstream 5.0kb upstream 9861 true scaffold_9: 16443701-16453561 Setaria italica
Seita.9G221400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 16448562-16453561 Setaria italica
Seita.9G221400 5.0kb downstream 5.0kb downstream 9861 true scaffold_9: 16438701-16448561 Setaria italica
Seita.9G221400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 16438701-16443700 Setaria italica
Seita.9G221400 10.0kb upstream 10.0kb upstream 14861 true scaffold_9: 16443701-16458561 Setaria italica
Seita.9G221400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 16448562-16458561 Setaria italica
Seita.9G221400 10.0kb downstream 10.0kb downstream 14861 true scaffold_9: 16433701-16448561 Setaria italica
Seita.9G221400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 16433701-16443700 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177129 5267 Panicoideae View MSA
124580783 5269 Grass View MSA
122045526 5273 Angiosperm View MSA
121345856 5274 Embryophyte View MSA
123380279 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.709        
cufflinks 3.174        
cufflinks 2.091        
cufflinks 1.566        
cufflinks 2.765        
cufflinks 2.943        
cufflinks 2.822        
cufflinks 2.669        
cufflinks 4.94       High
cufflinks 2.722        
cufflinks 2.452        
cufflinks 1.242       Low
cufflinks 0.852       Low
cufflinks 2.496        
cufflinks 1.64        
cufflinks 3.031        
cufflinks 1.451        
cufflinks 4.349       High
cufflinks 1.533        
cufflinks 1.263       Low

0 Strain