Gene : Seita.9G224600 S. italica v2.2
Defline:  (1 of 1) PTHR11226 - UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE Genomic Order:  2246
Name:  ? Seita.9G224600 Secondary Identifier:  ? PAC:32691372
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G224600 0.5kb upstream 0.5kb upstream 20961 true scaffold_9: 16767612-16788572 Setaria italica
Seita.9G224600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16767612-16768111 Setaria italica
Seita.9G224600 0.5kb downstream 0.5kb downstream 20961 true scaffold_9: 16768112-16789072 Setaria italica
Seita.9G224600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 16788573-16789072 Setaria italica
Seita.9G224600 1.0kb upstream 1.0kb upstream 21461 true scaffold_9: 16767112-16788572 Setaria italica
Seita.9G224600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 16767112-16768111 Setaria italica
Seita.9G224600 1.0kb downstream 1.0kb downstream 21461 true scaffold_9: 16768112-16789572 Setaria italica
Seita.9G224600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 16788573-16789572 Setaria italica
Seita.9G224600 2.0kb upstream 2.0kb upstream 22461 true scaffold_9: 16766112-16788572 Setaria italica
Seita.9G224600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 16766112-16768111 Setaria italica
Seita.9G224600 2.0kb downstream 2.0kb downstream 22461 true scaffold_9: 16768112-16790572 Setaria italica
Seita.9G224600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 16788573-16790572 Setaria italica
Seita.9G224600 5.0kb upstream 5.0kb upstream 25461 true scaffold_9: 16763112-16788572 Setaria italica
Seita.9G224600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 16763112-16768111 Setaria italica
Seita.9G224600 5.0kb downstream 5.0kb downstream 25461 true scaffold_9: 16768112-16793572 Setaria italica
Seita.9G224600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 16788573-16793572 Setaria italica
Seita.9G224600 10.0kb upstream 10.0kb upstream 30461 true scaffold_9: 16758112-16788572 Setaria italica
Seita.9G224600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 16758112-16768111 Setaria italica
Seita.9G224600 10.0kb downstream 10.0kb downstream 30461 true scaffold_9: 16768112-16798572 Setaria italica
Seita.9G224600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 16788573-16798572 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041493 5273 Angiosperm View MSA
122176452 5267 Panicoideae View MSA
124581040 5269 Grass View MSA
121345122 5274 Embryophyte View MSA
123424904 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.543       High
cufflinks 9.515        
cufflinks 11.584     High High
cufflinks 7.004        
cufflinks 6.11       Low
cufflinks 9.287        
cufflinks 8.354        
cufflinks 7.803        
cufflinks 6.867        
cufflinks 5.778       Low
cufflinks 11.166       High
cufflinks 8.138        
cufflinks 9.315        
cufflinks 11.055       High
cufflinks 12.422       High
cufflinks 6.357       Low
cufflinks 8.972        
cufflinks 6.428       Low
cufflinks 7.436        
cufflinks 10.1        

0 Strain