Gene : Seita.9G224900 S. italica v2.2
Defline:  (1 of 5) 3.2.1.45 - Glucosylceramidase / D-glucosyl-N-acylsphingosine glucohydrolase Genomic Order:  2249
Name:  ? Seita.9G224900 Secondary Identifier:  ? PAC:32693633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G224900 0.5kb upstream 0.5kb upstream 8680 true scaffold_9: 16823631-16832310 Setaria italica
Seita.9G224900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16823631-16824130 Setaria italica
Seita.9G224900 0.5kb downstream 0.5kb downstream 8680 true scaffold_9: 16824131-16832810 Setaria italica
Seita.9G224900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 16832311-16832810 Setaria italica
Seita.9G224900 1.0kb upstream 1.0kb upstream 9180 true scaffold_9: 16823131-16832310 Setaria italica
Seita.9G224900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 16823131-16824130 Setaria italica
Seita.9G224900 1.0kb downstream 1.0kb downstream 9180 true scaffold_9: 16824131-16833310 Setaria italica
Seita.9G224900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 16832311-16833310 Setaria italica
Seita.9G224900 2.0kb upstream 2.0kb upstream 10180 true scaffold_9: 16822131-16832310 Setaria italica
Seita.9G224900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 16822131-16824130 Setaria italica
Seita.9G224900 2.0kb downstream 2.0kb downstream 10180 true scaffold_9: 16824131-16834310 Setaria italica
Seita.9G224900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 16832311-16834310 Setaria italica
Seita.9G224900 5.0kb upstream 5.0kb upstream 13180 true scaffold_9: 16819131-16832310 Setaria italica
Seita.9G224900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 16819131-16824130 Setaria italica
Seita.9G224900 5.0kb downstream 5.0kb downstream 13180 true scaffold_9: 16824131-16837310 Setaria italica
Seita.9G224900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 16832311-16837310 Setaria italica
Seita.9G224900 10.0kb upstream 10.0kb upstream 18180 true scaffold_9: 16814131-16832310 Setaria italica
Seita.9G224900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 16814131-16824130 Setaria italica
Seita.9G224900 10.0kb downstream 10.0kb downstream 18180 true scaffold_9: 16824131-16842310 Setaria italica
Seita.9G224900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 16832311-16842310 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182678 5267 Panicoideae View MSA
124571212 5269 Grass View MSA
122045045 5273 Angiosperm View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.67     High High
cufflinks 14.059     High  
cufflinks 5.096       Low
cufflinks 6.716       Low
cufflinks 7.753       Low
cufflinks 15.881     High High
cufflinks 10.743        
cufflinks 10.94        
cufflinks 10.384        
cufflinks 10.198        
cufflinks 13.938     High  
cufflinks 9.62        
cufflinks 14.32     High  
cufflinks 12.945        
cufflinks 11.895        
cufflinks 14.581     High  
cufflinks 8.712        
cufflinks 10.003        
cufflinks 19.141     High High
cufflinks 11.46        

0 Strain