Gene : Seita.9G230800 S. italica v2.2
Defline:  (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338) Genomic Order:  2308
Name:  ? Seita.9G230800 Secondary Identifier:  ? PAC:32688793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G230800 0.5kb upstream 0.5kb upstream 5540 true scaffold_9: 17410777-17416316 Setaria italica
Seita.9G230800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 17410777-17411276 Setaria italica
Seita.9G230800 0.5kb downstream 0.5kb downstream 5540 true scaffold_9: 17411277-17416816 Setaria italica
Seita.9G230800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 17416317-17416816 Setaria italica
Seita.9G230800 1.0kb upstream 1.0kb upstream 6040 true scaffold_9: 17410277-17416316 Setaria italica
Seita.9G230800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 17410277-17411276 Setaria italica
Seita.9G230800 1.0kb downstream 1.0kb downstream 6040 true scaffold_9: 17411277-17417316 Setaria italica
Seita.9G230800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 17416317-17417316 Setaria italica
Seita.9G230800 2.0kb upstream 2.0kb upstream 7040 true scaffold_9: 17409277-17416316 Setaria italica
Seita.9G230800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 17409277-17411276 Setaria italica
Seita.9G230800 2.0kb downstream 2.0kb downstream 7040 true scaffold_9: 17411277-17418316 Setaria italica
Seita.9G230800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 17416317-17418316 Setaria italica
Seita.9G230800 5.0kb upstream 5.0kb upstream 10040 true scaffold_9: 17406277-17416316 Setaria italica
Seita.9G230800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 17406277-17411276 Setaria italica
Seita.9G230800 5.0kb downstream 5.0kb downstream 10040 true scaffold_9: 17411277-17421316 Setaria italica
Seita.9G230800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 17416317-17421316 Setaria italica
Seita.9G230800 10.0kb upstream 10.0kb upstream 15040 true scaffold_9: 17401277-17416316 Setaria italica
Seita.9G230800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 17401277-17411276 Setaria italica
Seita.9G230800 10.0kb downstream 10.0kb downstream 15040 true scaffold_9: 17411277-17426316 Setaria italica
Seita.9G230800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 17416317-17426316 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186632 5267 Panicoideae View MSA
124570541 5269 Grass View MSA
122043338 5273 Angiosperm View MSA
121346049 5274 Embryophyte View MSA
123425162 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.796     High  
cufflinks 2.467       Low
cufflinks 32.191     High  
cufflinks 30.61     High  
cufflinks 22.991     High  
cufflinks 2.192       Low
cufflinks 4.787       Low
cufflinks 7.76        
cufflinks 6.781        
cufflinks 19.075     High  
cufflinks 12.197        
cufflinks 38.312     High High
cufflinks 34.361     High  
cufflinks 20.591     High  
cufflinks 12.462        
cufflinks 18.731     High  
cufflinks 16.139     High  
cufflinks 106.405     High High
cufflinks 29.394     High  
cufflinks 6.471        

0 Strain