Gene : Seita.9G229000 S. italica v2.2
Defline:  (1 of 2) PTHR11661:SF1 - 39S RIBOSOMAL PROTEIN L11, MITOCHONDRIAL Genomic Order:  2290
Name:  ? Seita.9G229000 Secondary Identifier:  ? PAC:32687459
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G229000 0.5kb upstream 0.5kb upstream 2396 true scaffold_9: 17265463-17267858 Setaria italica
Seita.9G229000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 17265463-17265962 Setaria italica
Seita.9G229000 0.5kb downstream 0.5kb downstream 2396 true scaffold_9: 17265963-17268358 Setaria italica
Seita.9G229000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 17267859-17268358 Setaria italica
Seita.9G229000 1.0kb upstream 1.0kb upstream 2896 true scaffold_9: 17264963-17267858 Setaria italica
Seita.9G229000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 17264963-17265962 Setaria italica
Seita.9G229000 1.0kb downstream 1.0kb downstream 2896 true scaffold_9: 17265963-17268858 Setaria italica
Seita.9G229000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 17267859-17268858 Setaria italica
Seita.9G229000 2.0kb upstream 2.0kb upstream 3896 true scaffold_9: 17263963-17267858 Setaria italica
Seita.9G229000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 17263963-17265962 Setaria italica
Seita.9G229000 2.0kb downstream 2.0kb downstream 3896 true scaffold_9: 17265963-17269858 Setaria italica
Seita.9G229000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 17267859-17269858 Setaria italica
Seita.9G229000 5.0kb upstream 5.0kb upstream 6896 true scaffold_9: 17260963-17267858 Setaria italica
Seita.9G229000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 17260963-17265962 Setaria italica
Seita.9G229000 5.0kb downstream 5.0kb downstream 6896 true scaffold_9: 17265963-17272858 Setaria italica
Seita.9G229000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 17267859-17272858 Setaria italica
Seita.9G229000 10.0kb upstream 10.0kb upstream 11896 true scaffold_9: 17255963-17267858 Setaria italica
Seita.9G229000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 17255963-17265962 Setaria italica
Seita.9G229000 10.0kb downstream 10.0kb downstream 11896 true scaffold_9: 17265963-17277858 Setaria italica
Seita.9G229000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 17267859-17277858 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027971 5273 Angiosperm View MSA
122177574 5267 Panicoideae View MSA
124587008 5269 Grass View MSA
121346604 5274 Embryophyte View MSA
123425186 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.544        
cufflinks 5.999        
cufflinks 2.796       Low
cufflinks 3.143       Low
cufflinks 4.949        
cufflinks 6.484        
cufflinks 4.455        
cufflinks 6.628        
cufflinks 7.636       High
cufflinks 8.161       High
cufflinks 4.826        
cufflinks 4.202        
cufflinks 4.52        
cufflinks 3.288       Low
cufflinks 4.811        
cufflinks 4.099        
cufflinks 6.731       High
cufflinks 3.391       Low
cufflinks 2.617       Low
cufflinks 5.21        

0 Strain