Gene : Seita.9G234500 S. italica v2.2
Genomic Order:  2345 Name:  ? Seita.9G234500
Secondary Identifier:  ? PAC:32691694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G234500 0.5kb upstream 0.5kb upstream 2946 true scaffold_9: 17914573-17917518 Setaria italica
Seita.9G234500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 17917019-17917518 Setaria italica
Seita.9G234500 0.5kb downstream 0.5kb downstream 2946 true scaffold_9: 17914073-17917018 Setaria italica
Seita.9G234500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 17914073-17914572 Setaria italica
Seita.9G234500 1.0kb upstream 1.0kb upstream 3446 true scaffold_9: 17914573-17918018 Setaria italica
Seita.9G234500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 17917019-17918018 Setaria italica
Seita.9G234500 1.0kb downstream 1.0kb downstream 3446 true scaffold_9: 17913573-17917018 Setaria italica
Seita.9G234500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 17913573-17914572 Setaria italica
Seita.9G234500 2.0kb upstream 2.0kb upstream 4446 true scaffold_9: 17914573-17919018 Setaria italica
Seita.9G234500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 17917019-17919018 Setaria italica
Seita.9G234500 2.0kb downstream 2.0kb downstream 4446 true scaffold_9: 17912573-17917018 Setaria italica
Seita.9G234500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 17912573-17914572 Setaria italica
Seita.9G234500 5.0kb upstream 5.0kb upstream 7446 true scaffold_9: 17914573-17922018 Setaria italica
Seita.9G234500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 17917019-17922018 Setaria italica
Seita.9G234500 5.0kb downstream 5.0kb downstream 7446 true scaffold_9: 17909573-17917018 Setaria italica
Seita.9G234500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 17909573-17914572 Setaria italica
Seita.9G234500 10.0kb upstream 10.0kb upstream 12446 true scaffold_9: 17914573-17927018 Setaria italica
Seita.9G234500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 17917019-17927018 Setaria italica
Seita.9G234500 10.0kb downstream 10.0kb downstream 12446 true scaffold_9: 17904573-17917018 Setaria italica
Seita.9G234500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 17904573-17914572 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179202 5267 Panicoideae View MSA
124580612 5269 Grass View MSA
122047818 5273 Angiosperm View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.077     High  
cufflinks 68.3     High High
cufflinks 5.06       Low
cufflinks 4.833       Low
cufflinks 10.572        
cufflinks 63.215     High High
cufflinks 35.811     High  
cufflinks 29.604     High  
cufflinks 29.791     High  
cufflinks 35.551     High  
cufflinks 53.53     High High
cufflinks 25.621     High  
cufflinks 21.079     High  
cufflinks 8.097       Low
cufflinks 34.974     High  
cufflinks 19.1     High  
cufflinks 36.22     High  
cufflinks 14.483     High  
cufflinks 4.875       Low
cufflinks 36.443     High  

0 Strain