Gene : Seita.9G239000 S. italica v2.2
Defline:  (1 of 1) PTHR10741:SF2 - TRANSLIN Genomic Order:  2390
Name:  ? Seita.9G239000 Secondary Identifier:  ? PAC:32690555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G239000 0.5kb upstream 0.5kb upstream 9690 true scaffold_9: 18545565-18555254 Setaria italica
Seita.9G239000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18554755-18555254 Setaria italica
Seita.9G239000 0.5kb downstream 0.5kb downstream 9690 true scaffold_9: 18545065-18554754 Setaria italica
Seita.9G239000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18545065-18545564 Setaria italica
Seita.9G239000 1.0kb upstream 1.0kb upstream 10190 true scaffold_9: 18545565-18555754 Setaria italica
Seita.9G239000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18554755-18555754 Setaria italica
Seita.9G239000 1.0kb downstream 1.0kb downstream 10190 true scaffold_9: 18544565-18554754 Setaria italica
Seita.9G239000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18544565-18545564 Setaria italica
Seita.9G239000 2.0kb upstream 2.0kb upstream 11190 true scaffold_9: 18545565-18556754 Setaria italica
Seita.9G239000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18554755-18556754 Setaria italica
Seita.9G239000 2.0kb downstream 2.0kb downstream 11190 true scaffold_9: 18543565-18554754 Setaria italica
Seita.9G239000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18543565-18545564 Setaria italica
Seita.9G239000 5.0kb upstream 5.0kb upstream 14190 true scaffold_9: 18545565-18559754 Setaria italica
Seita.9G239000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18554755-18559754 Setaria italica
Seita.9G239000 5.0kb downstream 5.0kb downstream 14190 true scaffold_9: 18540565-18554754 Setaria italica
Seita.9G239000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18540565-18545564 Setaria italica
Seita.9G239000 10.0kb upstream 10.0kb upstream 19190 true scaffold_9: 18545565-18564754 Setaria italica
Seita.9G239000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18554755-18564754 Setaria italica
Seita.9G239000 10.0kb downstream 10.0kb downstream 19190 true scaffold_9: 18535565-18554754 Setaria italica
Seita.9G239000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18535565-18545564 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195017 5267 Panicoideae View MSA
124570028 5269 Grass View MSA
122045225 5273 Angiosperm View MSA
121345043 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.364        
cufflinks 0.729        
cufflinks 0.162        
cufflinks 0.046     Low Low
cufflinks 0.072     Low Low
cufflinks 0.777       High
cufflinks 0.297        
cufflinks 0.966       High
cufflinks 0.514        
cufflinks 0.809       High
cufflinks 0.446        
cufflinks 0.465        
cufflinks 0.273        
cufflinks 0.398        
cufflinks 0.528        
cufflinks 0.147        
cufflinks 0.63        
cufflinks 0.114       Low
cufflinks 0.066     Low Low
cufflinks 0.582        

0 Strain