Gene : Seita.9G239400 S. italica v2.2
Defline:  (1 of 1406) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase Genomic Order:  2394
Name:  ? Seita.9G239400 Secondary Identifier:  ? PAC:32692153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G239400 0.5kb upstream 0.5kb upstream 3926 true scaffold_9: 18638202-18642127 Setaria italica
Seita.9G239400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18638202-18638701 Setaria italica
Seita.9G239400 0.5kb downstream 0.5kb downstream 3926 true scaffold_9: 18638702-18642627 Setaria italica
Seita.9G239400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18642128-18642627 Setaria italica
Seita.9G239400 1.0kb upstream 1.0kb upstream 4426 true scaffold_9: 18637702-18642127 Setaria italica
Seita.9G239400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18637702-18638701 Setaria italica
Seita.9G239400 1.0kb downstream 1.0kb downstream 4426 true scaffold_9: 18638702-18643127 Setaria italica
Seita.9G239400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18642128-18643127 Setaria italica
Seita.9G239400 2.0kb upstream 2.0kb upstream 5426 true scaffold_9: 18636702-18642127 Setaria italica
Seita.9G239400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18636702-18638701 Setaria italica
Seita.9G239400 2.0kb downstream 2.0kb downstream 5426 true scaffold_9: 18638702-18644127 Setaria italica
Seita.9G239400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18642128-18644127 Setaria italica
Seita.9G239400 5.0kb upstream 5.0kb upstream 8426 true scaffold_9: 18633702-18642127 Setaria italica
Seita.9G239400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18633702-18638701 Setaria italica
Seita.9G239400 5.0kb downstream 5.0kb downstream 8426 true scaffold_9: 18638702-18647127 Setaria italica
Seita.9G239400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18642128-18647127 Setaria italica
Seita.9G239400 10.0kb upstream 10.0kb upstream 13426 true scaffold_9: 18628702-18642127 Setaria italica
Seita.9G239400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18628702-18638701 Setaria italica
Seita.9G239400 10.0kb downstream 10.0kb downstream 13426 true scaffold_9: 18638702-18652127 Setaria italica
Seita.9G239400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18642128-18652127 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188735 5267 Panicoideae View MSA
124576732 5269 Grass View MSA
122046245 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.616        
cufflinks 1.625        
cufflinks 1.341        
cufflinks 1.207        
cufflinks 1.035       Low
cufflinks 1.457        
cufflinks 1.569        
cufflinks 1.219        
cufflinks 0.869       Low
cufflinks 1.696        
cufflinks 2.342        
cufflinks 3.839       High
cufflinks 2.937       High
cufflinks 1.854        
cufflinks 3.144       High
cufflinks 1.255        
cufflinks 3.957       High
cufflinks 1.951        
cufflinks 1.25        
cufflinks 2.745        

0 Strain