Gene : Seita.9G239800 S. italica v2.2
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE Genomic Order:  2398
Name:  ? Seita.9G239800 Secondary Identifier:  ? PAC:32690593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G239800 0.5kb upstream 0.5kb upstream 9559 true scaffold_9: 18707228-18716786 Setaria italica
Seita.9G239800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18707228-18707727 Setaria italica
Seita.9G239800 0.5kb downstream 0.5kb downstream 9559 true scaffold_9: 18707728-18717286 Setaria italica
Seita.9G239800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18716787-18717286 Setaria italica
Seita.9G239800 1.0kb upstream 1.0kb upstream 10059 true scaffold_9: 18706728-18716786 Setaria italica
Seita.9G239800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18706728-18707727 Setaria italica
Seita.9G239800 1.0kb downstream 1.0kb downstream 10059 true scaffold_9: 18707728-18717786 Setaria italica
Seita.9G239800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18716787-18717786 Setaria italica
Seita.9G239800 2.0kb upstream 2.0kb upstream 11059 true scaffold_9: 18705728-18716786 Setaria italica
Seita.9G239800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18705728-18707727 Setaria italica
Seita.9G239800 2.0kb downstream 2.0kb downstream 11059 true scaffold_9: 18707728-18718786 Setaria italica
Seita.9G239800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18716787-18718786 Setaria italica
Seita.9G239800 5.0kb upstream 5.0kb upstream 14059 true scaffold_9: 18702728-18716786 Setaria italica
Seita.9G239800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18702728-18707727 Setaria italica
Seita.9G239800 5.0kb downstream 5.0kb downstream 14059 true scaffold_9: 18707728-18721786 Setaria italica
Seita.9G239800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18716787-18721786 Setaria italica
Seita.9G239800 10.0kb upstream 10.0kb upstream 19059 true scaffold_9: 18697728-18716786 Setaria italica
Seita.9G239800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18697728-18707727 Setaria italica
Seita.9G239800 10.0kb downstream 10.0kb downstream 19059 true scaffold_9: 18707728-18726786 Setaria italica
Seita.9G239800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18716787-18726786 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190805 5267 Panicoideae View MSA
124579298 5269 Grass View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.219        
cufflinks 3.933        
cufflinks 1.765        
cufflinks 0.799        
cufflinks 2.176        
cufflinks 3.72        
cufflinks 5.004        
cufflinks 6.675       High
cufflinks 8.977       High
cufflinks 2.008        
cufflinks 3.196        
cufflinks 0.342       Low
cufflinks 0.53       Low
cufflinks 2.595        
cufflinks 0.533       Low
cufflinks 6.657       High
cufflinks 0.467       Low
cufflinks 3.32        
cufflinks 0.591       Low
cufflinks 0.47       Low

0 Strain