Gene : Seita.9G180800 S. italica v2.2
Defline:  (1 of 10) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1808
Name:  ? Seita.9G180800 Secondary Identifier:  ? PAC:32691622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G180800 0.5kb upstream 0.5kb upstream 2676 true scaffold_9: 12436038-12438713 Setaria italica
Seita.9G180800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 12438214-12438713 Setaria italica
Seita.9G180800 0.5kb downstream 0.5kb downstream 2676 true scaffold_9: 12435538-12438213 Setaria italica
Seita.9G180800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 12435538-12436037 Setaria italica
Seita.9G180800 1.0kb upstream 1.0kb upstream 3176 true scaffold_9: 12436038-12439213 Setaria italica
Seita.9G180800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 12438214-12439213 Setaria italica
Seita.9G180800 1.0kb downstream 1.0kb downstream 3176 true scaffold_9: 12435038-12438213 Setaria italica
Seita.9G180800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 12435038-12436037 Setaria italica
Seita.9G180800 2.0kb upstream 2.0kb upstream 4176 true scaffold_9: 12436038-12440213 Setaria italica
Seita.9G180800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 12438214-12440213 Setaria italica
Seita.9G180800 2.0kb downstream 2.0kb downstream 4176 true scaffold_9: 12434038-12438213 Setaria italica
Seita.9G180800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 12434038-12436037 Setaria italica
Seita.9G180800 5.0kb upstream 5.0kb upstream 7176 true scaffold_9: 12436038-12443213 Setaria italica
Seita.9G180800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 12438214-12443213 Setaria italica
Seita.9G180800 5.0kb downstream 5.0kb downstream 7176 true scaffold_9: 12431038-12438213 Setaria italica
Seita.9G180800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 12431038-12436037 Setaria italica
Seita.9G180800 10.0kb upstream 10.0kb upstream 12176 true scaffold_9: 12436038-12448213 Setaria italica
Seita.9G180800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 12438214-12448213 Setaria italica
Seita.9G180800 10.0kb downstream 10.0kb downstream 12176 true scaffold_9: 12426038-12438213 Setaria italica
Seita.9G180800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 12426038-12436037 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122185308 5267 Panicoideae View MSA
124578863 5269 Grass View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain