Gene : Seita.9G181600 S. italica v2.2
Defline:  (1 of 2) PTHR10641:SF532 - MYB DOMAIN PROTEIN 120-RELATED Genomic Order:  1816
Name:  ? Seita.9G181600 Secondary Identifier:  ? PAC:32686590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G181600 0.5kb upstream 0.5kb upstream 3697 true scaffold_9: 12504718-12508414 Setaria italica
Seita.9G181600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 12507915-12508414 Setaria italica
Seita.9G181600 0.5kb downstream 0.5kb downstream 3697 true scaffold_9: 12504218-12507914 Setaria italica
Seita.9G181600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 12504218-12504717 Setaria italica
Seita.9G181600 1.0kb upstream 1.0kb upstream 4197 true scaffold_9: 12504718-12508914 Setaria italica
Seita.9G181600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 12507915-12508914 Setaria italica
Seita.9G181600 1.0kb downstream 1.0kb downstream 4197 true scaffold_9: 12503718-12507914 Setaria italica
Seita.9G181600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 12503718-12504717 Setaria italica
Seita.9G181600 2.0kb upstream 2.0kb upstream 5197 true scaffold_9: 12504718-12509914 Setaria italica
Seita.9G181600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 12507915-12509914 Setaria italica
Seita.9G181600 2.0kb downstream 2.0kb downstream 5197 true scaffold_9: 12502718-12507914 Setaria italica
Seita.9G181600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 12502718-12504717 Setaria italica
Seita.9G181600 5.0kb upstream 5.0kb upstream 8197 true scaffold_9: 12504718-12512914 Setaria italica
Seita.9G181600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 12507915-12512914 Setaria italica
Seita.9G181600 5.0kb downstream 5.0kb downstream 8197 true scaffold_9: 12499718-12507914 Setaria italica
Seita.9G181600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 12499718-12504717 Setaria italica
Seita.9G181600 10.0kb upstream 10.0kb upstream 13197 true scaffold_9: 12504718-12517914 Setaria italica
Seita.9G181600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 12507915-12517914 Setaria italica
Seita.9G181600 10.0kb downstream 10.0kb downstream 13197 true scaffold_9: 12494718-12507914 Setaria italica
Seita.9G181600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 12494718-12504717 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184282 5267 Panicoideae View MSA
124569184 5269 Grass View MSA
122048275 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.309       High
cufflinks 0.039     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low  
cufflinks 0.027     Low  
cufflinks 0.031     Low  
cufflinks 0.026     Low  
cufflinks 0.301     Low High
cufflinks 0.04     Low  
cufflinks 0.046     Low  
cufflinks 0.145     Low  
cufflinks 0.116     Low  
cufflinks 0.131        
cufflinks 0.019     Low Low
cufflinks 0.094     Low  
cufflinks 0.017     Low Low
cufflinks 0.035     Low  
cufflinks 0.166       High

0 Strain