Gene : Seita.9G189300 S. italica v2.2
Defline:  (1 of 63) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1893
Name:  ? Seita.9G189300 Secondary Identifier:  ? PAC:32693686
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G189300 0.5kb upstream 0.5kb upstream 2850 true scaffold_9: 13223392-13226241 Setaria italica
Seita.9G189300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 13225742-13226241 Setaria italica
Seita.9G189300 0.5kb downstream 0.5kb downstream 2850 true scaffold_9: 13222892-13225741 Setaria italica
Seita.9G189300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 13222892-13223391 Setaria italica
Seita.9G189300 1.0kb upstream 1.0kb upstream 3350 true scaffold_9: 13223392-13226741 Setaria italica
Seita.9G189300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 13225742-13226741 Setaria italica
Seita.9G189300 1.0kb downstream 1.0kb downstream 3350 true scaffold_9: 13222392-13225741 Setaria italica
Seita.9G189300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 13222392-13223391 Setaria italica
Seita.9G189300 2.0kb upstream 2.0kb upstream 4350 true scaffold_9: 13223392-13227741 Setaria italica
Seita.9G189300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 13225742-13227741 Setaria italica
Seita.9G189300 2.0kb downstream 2.0kb downstream 4350 true scaffold_9: 13221392-13225741 Setaria italica
Seita.9G189300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 13221392-13223391 Setaria italica
Seita.9G189300 5.0kb upstream 5.0kb upstream 7350 true scaffold_9: 13223392-13230741 Setaria italica
Seita.9G189300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 13225742-13230741 Setaria italica
Seita.9G189300 5.0kb downstream 5.0kb downstream 7350 true scaffold_9: 13218392-13225741 Setaria italica
Seita.9G189300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 13218392-13223391 Setaria italica
Seita.9G189300 10.0kb upstream 10.0kb upstream 12350 true scaffold_9: 13223392-13235741 Setaria italica
Seita.9G189300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 13225742-13235741 Setaria italica
Seita.9G189300 10.0kb downstream 10.0kb downstream 12350 true scaffold_9: 13213392-13225741 Setaria italica
Seita.9G189300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 13213392-13223391 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122196245 5267 Panicoideae View MSA
124586908 5269 Grass View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.45       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.032     Low  
cufflinks 0.007     Low Low
cufflinks 0.007     Low Low
cufflinks 0.031     Low  
cufflinks 0.009     Low  
cufflinks 0.026     Low  
cufflinks 0.652       High
cufflinks 0.097     Low  
cufflinks 0.007     Low Low
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.017     Low  
cufflinks 0.016     Low  
cufflinks 0.072     Low  
cufflinks 0.016     Low  
cufflinks 0.029     Low  

0 Strain