Gene : Seita.9G187600 S. italica v2.2
Defline:  (1 of 1) PTHR21495//PTHR21495:SF47 - NUCLEOPORIN-RELATED Genomic Order:  1876
Name:  ? Seita.9G187600 Secondary Identifier:  ? PAC:32691482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G187600 0.5kb upstream 0.5kb upstream 1597 true scaffold_9: 13072026-13073622 Setaria italica
Seita.9G187600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 13072026-13072525 Setaria italica
Seita.9G187600 0.5kb downstream 0.5kb downstream 1597 true scaffold_9: 13072526-13074122 Setaria italica
Seita.9G187600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 13073623-13074122 Setaria italica
Seita.9G187600 1.0kb upstream 1.0kb upstream 2097 true scaffold_9: 13071526-13073622 Setaria italica
Seita.9G187600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 13071526-13072525 Setaria italica
Seita.9G187600 1.0kb downstream 1.0kb downstream 2097 true scaffold_9: 13072526-13074622 Setaria italica
Seita.9G187600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 13073623-13074622 Setaria italica
Seita.9G187600 2.0kb upstream 2.0kb upstream 3097 true scaffold_9: 13070526-13073622 Setaria italica
Seita.9G187600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 13070526-13072525 Setaria italica
Seita.9G187600 2.0kb downstream 2.0kb downstream 3097 true scaffold_9: 13072526-13075622 Setaria italica
Seita.9G187600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 13073623-13075622 Setaria italica
Seita.9G187600 5.0kb upstream 5.0kb upstream 6097 true scaffold_9: 13067526-13073622 Setaria italica
Seita.9G187600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 13067526-13072525 Setaria italica
Seita.9G187600 5.0kb downstream 5.0kb downstream 6097 true scaffold_9: 13072526-13078622 Setaria italica
Seita.9G187600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 13073623-13078622 Setaria italica
Seita.9G187600 10.0kb upstream 10.0kb upstream 11097 true scaffold_9: 13062526-13073622 Setaria italica
Seita.9G187600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 13062526-13072525 Setaria italica
Seita.9G187600 10.0kb downstream 10.0kb downstream 11097 true scaffold_9: 13072526-13083622 Setaria italica
Seita.9G187600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 13073623-13083622 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031282 5273 Angiosperm View MSA
122181875 5267 Panicoideae View MSA
124589967 5269 Grass View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089     Low  
cufflinks 0.365       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.326       High
cufflinks 0.115        
cufflinks 0.211        
cufflinks 0.067     Low  
cufflinks 0.176     Low  
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.037     Low  
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain