Gene : Seita.9G195900 S. italica v2.2
Defline:  (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1959
Name:  ? Seita.9G195900 Secondary Identifier:  ? PAC:32689396
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G195900 0.5kb upstream 0.5kb upstream 5655 true scaffold_9: 14012968-14018622 Setaria italica
Seita.9G195900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14018123-14018622 Setaria italica
Seita.9G195900 0.5kb downstream 0.5kb downstream 5655 true scaffold_9: 14012468-14018122 Setaria italica
Seita.9G195900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14012468-14012967 Setaria italica
Seita.9G195900 1.0kb upstream 1.0kb upstream 6155 true scaffold_9: 14012968-14019122 Setaria italica
Seita.9G195900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14018123-14019122 Setaria italica
Seita.9G195900 1.0kb downstream 1.0kb downstream 6155 true scaffold_9: 14011968-14018122 Setaria italica
Seita.9G195900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14011968-14012967 Setaria italica
Seita.9G195900 2.0kb upstream 2.0kb upstream 7155 true scaffold_9: 14012968-14020122 Setaria italica
Seita.9G195900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14018123-14020122 Setaria italica
Seita.9G195900 2.0kb downstream 2.0kb downstream 7155 true scaffold_9: 14010968-14018122 Setaria italica
Seita.9G195900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14010968-14012967 Setaria italica
Seita.9G195900 5.0kb upstream 5.0kb upstream 10155 true scaffold_9: 14012968-14023122 Setaria italica
Seita.9G195900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14018123-14023122 Setaria italica
Seita.9G195900 5.0kb downstream 5.0kb downstream 10155 true scaffold_9: 14007968-14018122 Setaria italica
Seita.9G195900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14007968-14012967 Setaria italica
Seita.9G195900 10.0kb upstream 10.0kb upstream 15155 true scaffold_9: 14012968-14028122 Setaria italica
Seita.9G195900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14018123-14028122 Setaria italica
Seita.9G195900 10.0kb downstream 10.0kb downstream 15155 true scaffold_9: 14002968-14018122 Setaria italica
Seita.9G195900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14002968-14012967 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183171 5267 Panicoideae View MSA
124581203 5269 Grass View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.869        
cufflinks 1.608        
cufflinks 4.029        
cufflinks 3.855        
cufflinks 4.53        
cufflinks 1.644        
cufflinks 3.007        
cufflinks 4.617        
cufflinks 4.645        
cufflinks 1.644        
cufflinks 1.904        
cufflinks 1.293        
cufflinks 0.931       Low
cufflinks 5.879       High
cufflinks 0.915       Low
cufflinks 5.93       High
cufflinks 0.777       Low
cufflinks 5.413       High
cufflinks 3.809        
cufflinks 0.874       Low

0 Strain