Gene : Seita.9G204500 S. italica v2.2
Genomic Order:  2045 Name:  ? Seita.9G204500
Secondary Identifier:  ? PAC:32689093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G204500 0.5kb upstream 0.5kb upstream 3946 true scaffold_9: 14615993-14619938 Setaria italica
Seita.9G204500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14619439-14619938 Setaria italica
Seita.9G204500 0.5kb downstream 0.5kb downstream 3946 true scaffold_9: 14615493-14619438 Setaria italica
Seita.9G204500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14615493-14615992 Setaria italica
Seita.9G204500 1.0kb upstream 1.0kb upstream 4446 true scaffold_9: 14615993-14620438 Setaria italica
Seita.9G204500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14619439-14620438 Setaria italica
Seita.9G204500 1.0kb downstream 1.0kb downstream 4446 true scaffold_9: 14614993-14619438 Setaria italica
Seita.9G204500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14614993-14615992 Setaria italica
Seita.9G204500 2.0kb upstream 2.0kb upstream 5446 true scaffold_9: 14615993-14621438 Setaria italica
Seita.9G204500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14619439-14621438 Setaria italica
Seita.9G204500 2.0kb downstream 2.0kb downstream 5446 true scaffold_9: 14613993-14619438 Setaria italica
Seita.9G204500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14613993-14615992 Setaria italica
Seita.9G204500 5.0kb upstream 5.0kb upstream 8446 true scaffold_9: 14615993-14624438 Setaria italica
Seita.9G204500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14619439-14624438 Setaria italica
Seita.9G204500 5.0kb downstream 5.0kb downstream 8446 true scaffold_9: 14610993-14619438 Setaria italica
Seita.9G204500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14610993-14615992 Setaria italica
Seita.9G204500 10.0kb upstream 10.0kb upstream 13446 true scaffold_9: 14615993-14629438 Setaria italica
Seita.9G204500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14619439-14629438 Setaria italica
Seita.9G204500 10.0kb downstream 10.0kb downstream 13446 true scaffold_9: 14605993-14619438 Setaria italica
Seita.9G204500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14605993-14615992 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197999 5267 Panicoideae View MSA
124570066 5269 Grass View MSA
122046936 5273 Angiosperm View MSA
121344536 5274 Embryophyte View MSA
123424938 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.507        
cufflinks 0.93        
cufflinks 0.229       Low
cufflinks 0.373       Low
cufflinks 1.271        
cufflinks 0.723        
cufflinks 2.509       High
cufflinks 2.505       High
cufflinks 2.83       High
cufflinks 1.476        
cufflinks 1.206        
cufflinks 1.118        
cufflinks 1.103        
cufflinks 0.411       Low
cufflinks 3.063       High
cufflinks 2.021        
cufflinks 3.017       High
cufflinks 0.401       Low
cufflinks 0.469       Low
cufflinks 1.297        

0 Strain