Gene : Seita.9G202600 S. italica v2.2
Defline:  (1 of 2) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  2026
Name:  ? Seita.9G202600 Secondary Identifier:  ? PAC:32691763
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6351 Setaria italica pathologic  
Sitalica PWY-6352 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G202600 0.5kb upstream 0.5kb upstream 6337 true scaffold_9: 14491299-14497635 Setaria italica
Seita.9G202600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14497136-14497635 Setaria italica
Seita.9G202600 0.5kb downstream 0.5kb downstream 6337 true scaffold_9: 14490799-14497135 Setaria italica
Seita.9G202600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14490799-14491298 Setaria italica
Seita.9G202600 1.0kb upstream 1.0kb upstream 6837 true scaffold_9: 14491299-14498135 Setaria italica
Seita.9G202600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14497136-14498135 Setaria italica
Seita.9G202600 1.0kb downstream 1.0kb downstream 6837 true scaffold_9: 14490299-14497135 Setaria italica
Seita.9G202600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14490299-14491298 Setaria italica
Seita.9G202600 2.0kb upstream 2.0kb upstream 7837 true scaffold_9: 14491299-14499135 Setaria italica
Seita.9G202600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14497136-14499135 Setaria italica
Seita.9G202600 2.0kb downstream 2.0kb downstream 7837 true scaffold_9: 14489299-14497135 Setaria italica
Seita.9G202600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14489299-14491298 Setaria italica
Seita.9G202600 5.0kb upstream 5.0kb upstream 10837 true scaffold_9: 14491299-14502135 Setaria italica
Seita.9G202600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14497136-14502135 Setaria italica
Seita.9G202600 5.0kb downstream 5.0kb downstream 10837 true scaffold_9: 14486299-14497135 Setaria italica
Seita.9G202600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14486299-14491298 Setaria italica
Seita.9G202600 10.0kb upstream 10.0kb upstream 15837 true scaffold_9: 14491299-14507135 Setaria italica
Seita.9G202600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14497136-14507135 Setaria italica
Seita.9G202600 10.0kb downstream 10.0kb downstream 15837 true scaffold_9: 14481299-14497135 Setaria italica
Seita.9G202600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14481299-14491298 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122181250 5267 Panicoideae View MSA
124568328 5269 Grass View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1     High  
cufflinks 17.815     High  
cufflinks 24.651     High  
cufflinks 19.718     High  
cufflinks 18.531     High  
cufflinks 14.888     High  
cufflinks 15.008     High  
cufflinks 14.187     High  
cufflinks 12.182       Low
cufflinks 14.751        
cufflinks 22.958     High  
cufflinks 28.026     High High
cufflinks 25.653     High  
cufflinks 24.136     High  
cufflinks 36.359     High High
cufflinks 14.908     High  
cufflinks 24.535     High  
cufflinks 11.599     High Low
cufflinks 15.627     High  
cufflinks 30.661     High High

0 Strain