Gene : Seita.9G203900 S. italica v2.2
Genomic Order:  2039 Name:  ? Seita.9G203900
Secondary Identifier:  ? PAC:32690480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G203900 0.5kb upstream 0.5kb upstream 3633 true scaffold_9: 14587796-14591428 Setaria italica
Seita.9G203900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14590929-14591428 Setaria italica
Seita.9G203900 0.5kb downstream 0.5kb downstream 3633 true scaffold_9: 14587296-14590928 Setaria italica
Seita.9G203900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14587296-14587795 Setaria italica
Seita.9G203900 1.0kb upstream 1.0kb upstream 4133 true scaffold_9: 14587796-14591928 Setaria italica
Seita.9G203900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14590929-14591928 Setaria italica
Seita.9G203900 1.0kb downstream 1.0kb downstream 4133 true scaffold_9: 14586796-14590928 Setaria italica
Seita.9G203900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14586796-14587795 Setaria italica
Seita.9G203900 2.0kb upstream 2.0kb upstream 5133 true scaffold_9: 14587796-14592928 Setaria italica
Seita.9G203900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14590929-14592928 Setaria italica
Seita.9G203900 2.0kb downstream 2.0kb downstream 5133 true scaffold_9: 14585796-14590928 Setaria italica
Seita.9G203900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14585796-14587795 Setaria italica
Seita.9G203900 5.0kb upstream 5.0kb upstream 8133 true scaffold_9: 14587796-14595928 Setaria italica
Seita.9G203900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14590929-14595928 Setaria italica
Seita.9G203900 5.0kb downstream 5.0kb downstream 8133 true scaffold_9: 14582796-14590928 Setaria italica
Seita.9G203900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14582796-14587795 Setaria italica
Seita.9G203900 10.0kb upstream 10.0kb upstream 13133 true scaffold_9: 14587796-14600928 Setaria italica
Seita.9G203900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14590929-14600928 Setaria italica
Seita.9G203900 10.0kb downstream 10.0kb downstream 13133 true scaffold_9: 14577796-14590928 Setaria italica
Seita.9G203900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14577796-14587795 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182702 5267 Panicoideae View MSA
124582382 5269 Grass View MSA
122046877 5273 Angiosperm View MSA
121344318 5274 Embryophyte View MSA
123380022 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.616     High  
cufflinks 34.873     High  
cufflinks 56.125     High  
cufflinks 51.902     High  
cufflinks 39.948     High  
cufflinks 39.88     High  
cufflinks 36.493     High  
cufflinks 29.271     High  
cufflinks 27.209     High Low
cufflinks 20.632     High Low
cufflinks 29.115     High  
cufflinks 123.724     High High
cufflinks 55.81     High  
cufflinks 30.404     High  
cufflinks 43.214     High  
cufflinks 46.56     High  
cufflinks 74.578     High High
cufflinks 50.633     High  
cufflinks 47.727     High  
cufflinks 108.154     High High

0 Strain