Gene : Seita.9G208300 S. italica v2.2
Defline:  (1 of 72) PF00149 - Calcineurin-like phosphoesterase (Metallophos) Genomic Order:  2083
Name:  ? Seita.9G208300 Secondary Identifier:  ? PAC:32690830
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G208300 0.5kb upstream 0.5kb upstream 4436 true scaffold_9: 14965695-14970130 Setaria italica
Seita.9G208300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14965695-14966194 Setaria italica
Seita.9G208300 0.5kb downstream 0.5kb downstream 4436 true scaffold_9: 14966195-14970630 Setaria italica
Seita.9G208300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14970131-14970630 Setaria italica
Seita.9G208300 1.0kb upstream 1.0kb upstream 4936 true scaffold_9: 14965195-14970130 Setaria italica
Seita.9G208300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14965195-14966194 Setaria italica
Seita.9G208300 1.0kb downstream 1.0kb downstream 4936 true scaffold_9: 14966195-14971130 Setaria italica
Seita.9G208300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14970131-14971130 Setaria italica
Seita.9G208300 2.0kb upstream 2.0kb upstream 5936 true scaffold_9: 14964195-14970130 Setaria italica
Seita.9G208300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14964195-14966194 Setaria italica
Seita.9G208300 2.0kb downstream 2.0kb downstream 5936 true scaffold_9: 14966195-14972130 Setaria italica
Seita.9G208300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14970131-14972130 Setaria italica
Seita.9G208300 5.0kb upstream 5.0kb upstream 8936 true scaffold_9: 14961195-14970130 Setaria italica
Seita.9G208300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14961195-14966194 Setaria italica
Seita.9G208300 5.0kb downstream 5.0kb downstream 8936 true scaffold_9: 14966195-14975130 Setaria italica
Seita.9G208300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14970131-14975130 Setaria italica
Seita.9G208300 10.0kb upstream 10.0kb upstream 13936 true scaffold_9: 14956195-14970130 Setaria italica
Seita.9G208300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14956195-14966194 Setaria italica
Seita.9G208300 10.0kb downstream 10.0kb downstream 13936 true scaffold_9: 14966195-14980130 Setaria italica
Seita.9G208300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14970131-14980130 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175233 5267 Panicoideae View MSA
124569509 5269 Grass View MSA
122048487 5273 Angiosperm View MSA
121348333 5274 Embryophyte View MSA
123425755 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.034        
cufflinks 4.238        
cufflinks 3.282       Low
cufflinks 4.012        
cufflinks 4.783        
cufflinks 4.323        
cufflinks 5.092        
cufflinks 7.138        
cufflinks 7.023        
cufflinks 7.393        
cufflinks 5.565        
cufflinks 23.227     High High
cufflinks 7.103        
cufflinks 4.299        
cufflinks 6.981        
cufflinks 4.867        
cufflinks 10.151       High
cufflinks 5.674        
cufflinks 4.538        
cufflinks 11.802       High

0 Strain