Gene : Seita.9G209000 S. italica v2.2
Defline:  (1 of 14) PF01585 - G-patch domain (G-patch) Genomic Order:  2090
Name:  ? Seita.9G209000 Secondary Identifier:  ? PAC:32692436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G209000 0.5kb upstream 0.5kb upstream 2193 true scaffold_9: 15032473-15034665 Setaria italica
Seita.9G209000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 15032473-15032972 Setaria italica
Seita.9G209000 0.5kb downstream 0.5kb downstream 2193 true scaffold_9: 15032973-15035165 Setaria italica
Seita.9G209000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 15034666-15035165 Setaria italica
Seita.9G209000 1.0kb upstream 1.0kb upstream 2693 true scaffold_9: 15031973-15034665 Setaria italica
Seita.9G209000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15031973-15032972 Setaria italica
Seita.9G209000 1.0kb downstream 1.0kb downstream 2693 true scaffold_9: 15032973-15035665 Setaria italica
Seita.9G209000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 15034666-15035665 Setaria italica
Seita.9G209000 2.0kb upstream 2.0kb upstream 3693 true scaffold_9: 15030973-15034665 Setaria italica
Seita.9G209000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 15030973-15032972 Setaria italica
Seita.9G209000 2.0kb downstream 2.0kb downstream 3693 true scaffold_9: 15032973-15036665 Setaria italica
Seita.9G209000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 15034666-15036665 Setaria italica
Seita.9G209000 5.0kb upstream 5.0kb upstream 6693 true scaffold_9: 15027973-15034665 Setaria italica
Seita.9G209000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 15027973-15032972 Setaria italica
Seita.9G209000 5.0kb downstream 5.0kb downstream 6693 true scaffold_9: 15032973-15039665 Setaria italica
Seita.9G209000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 15034666-15039665 Setaria italica
Seita.9G209000 10.0kb upstream 10.0kb upstream 11693 true scaffold_9: 15022973-15034665 Setaria italica
Seita.9G209000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 15022973-15032972 Setaria italica
Seita.9G209000 10.0kb downstream 10.0kb downstream 11693 true scaffold_9: 15032973-15044665 Setaria italica
Seita.9G209000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 15034666-15044665 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177691 5267 Panicoideae View MSA
124573912 5269 Grass View MSA
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.746        
cufflinks 6.584        
cufflinks 3.594       Low
cufflinks 4.565        
cufflinks 4.682        
cufflinks 6.712        
cufflinks 5.717        
cufflinks 6.496        
cufflinks 5.592        
cufflinks 4.897        
cufflinks 4.12       Low
cufflinks 11.638       High
cufflinks 5.918        
cufflinks 5.002        
cufflinks 5.715        
cufflinks 5.525        
cufflinks 8.574       High
cufflinks 6.163        
cufflinks 4.798        
cufflinks 7.582       High

0 Strain