Gene : Seita.9G207700 S. italica v2.2
Defline:  (1 of 1) PTHR22911 - ACYL-MALONYL CONDENSING ENZYME-RELATED Genomic Order:  2077
Name:  ? Seita.9G207700 Secondary Identifier:  ? PAC:32690365
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G207700 0.5kb upstream 0.5kb upstream 3208 true scaffold_9: 14927662-14930869 Setaria italica
Seita.9G207700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14930370-14930869 Setaria italica
Seita.9G207700 0.5kb downstream 0.5kb downstream 3208 true scaffold_9: 14927162-14930369 Setaria italica
Seita.9G207700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14927162-14927661 Setaria italica
Seita.9G207700 1.0kb upstream 1.0kb upstream 3708 true scaffold_9: 14927662-14931369 Setaria italica
Seita.9G207700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14930370-14931369 Setaria italica
Seita.9G207700 1.0kb downstream 1.0kb downstream 3708 true scaffold_9: 14926662-14930369 Setaria italica
Seita.9G207700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14926662-14927661 Setaria italica
Seita.9G207700 2.0kb upstream 2.0kb upstream 4708 true scaffold_9: 14927662-14932369 Setaria italica
Seita.9G207700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14930370-14932369 Setaria italica
Seita.9G207700 2.0kb downstream 2.0kb downstream 4708 true scaffold_9: 14925662-14930369 Setaria italica
Seita.9G207700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14925662-14927661 Setaria italica
Seita.9G207700 5.0kb upstream 5.0kb upstream 7708 true scaffold_9: 14927662-14935369 Setaria italica
Seita.9G207700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14930370-14935369 Setaria italica
Seita.9G207700 5.0kb downstream 5.0kb downstream 7708 true scaffold_9: 14922662-14930369 Setaria italica
Seita.9G207700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14922662-14927661 Setaria italica
Seita.9G207700 10.0kb upstream 10.0kb upstream 12708 true scaffold_9: 14927662-14940369 Setaria italica
Seita.9G207700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14930370-14940369 Setaria italica
Seita.9G207700 10.0kb downstream 10.0kb downstream 12708 true scaffold_9: 14917662-14930369 Setaria italica
Seita.9G207700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14917662-14927661 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040883 5273 Angiosperm View MSA
122183135 5267 Panicoideae View MSA
124580980 5269 Grass View MSA
121351564 5274 Embryophyte View MSA
123424417 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.772        
cufflinks 13.239     High  
cufflinks 19.421     High High
cufflinks 17.9     High  
cufflinks 15.805     High  
cufflinks 15.208     High  
cufflinks 11.687        
cufflinks 14.299     High  
cufflinks 12.729     High  
cufflinks 3.04       Low
cufflinks 6.836        
cufflinks 4.36       Low
cufflinks 5.085        
cufflinks 13.447        
cufflinks 3.875       Low
cufflinks 17.613     High  
cufflinks 4.291       Low
cufflinks 6.749        
cufflinks 27.761     High High
cufflinks 4.322       Low

0 Strain