Gene : Seita.9G284300 S. italica v2.2
Genomic Order:  2843 Name:  ? Seita.9G284300
Secondary Identifier:  ? PAC:32692078
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G284300 0.5kb upstream 0.5kb upstream 4215 true scaffold_9: 30719274-30723488 Setaria italica
Seita.9G284300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 30722989-30723488 Setaria italica
Seita.9G284300 0.5kb downstream 0.5kb downstream 4215 true scaffold_9: 30718774-30722988 Setaria italica
Seita.9G284300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 30718774-30719273 Setaria italica
Seita.9G284300 1.0kb upstream 1.0kb upstream 4715 true scaffold_9: 30719274-30723988 Setaria italica
Seita.9G284300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 30722989-30723988 Setaria italica
Seita.9G284300 1.0kb downstream 1.0kb downstream 4715 true scaffold_9: 30718274-30722988 Setaria italica
Seita.9G284300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 30718274-30719273 Setaria italica
Seita.9G284300 2.0kb upstream 2.0kb upstream 5715 true scaffold_9: 30719274-30724988 Setaria italica
Seita.9G284300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 30722989-30724988 Setaria italica
Seita.9G284300 2.0kb downstream 2.0kb downstream 5715 true scaffold_9: 30717274-30722988 Setaria italica
Seita.9G284300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 30717274-30719273 Setaria italica
Seita.9G284300 5.0kb upstream 5.0kb upstream 8715 true scaffold_9: 30719274-30727988 Setaria italica
Seita.9G284300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 30722989-30727988 Setaria italica
Seita.9G284300 5.0kb downstream 5.0kb downstream 8715 true scaffold_9: 30714274-30722988 Setaria italica
Seita.9G284300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 30714274-30719273 Setaria italica
Seita.9G284300 10.0kb upstream 10.0kb upstream 13715 true scaffold_9: 30719274-30732988 Setaria italica
Seita.9G284300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 30722989-30732988 Setaria italica
Seita.9G284300 10.0kb downstream 10.0kb downstream 13715 true scaffold_9: 30709274-30722988 Setaria italica
Seita.9G284300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 30709274-30719273 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191067 5267 Panicoideae View MSA
124578267 5269 Grass View MSA
122047565 5273 Angiosperm View MSA
121345240 5274 Embryophyte View MSA
123426204 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.743        
cufflinks 4.828        
cufflinks 2.373        
cufflinks 2.3        
cufflinks 2.167       Low
cufflinks 5.521       High
cufflinks 2.921        
cufflinks 5.359       High
cufflinks 3.396        
cufflinks 3.992        
cufflinks 3.276        
cufflinks 4.555        
cufflinks 5.058        
cufflinks 2.329        
cufflinks 4.598        
cufflinks 2.172       Low
cufflinks 5.456       High
cufflinks 1.528       Low
cufflinks 2.012       Low
cufflinks 5.397       High

0 Strain