Gene : Seita.9G299000 S. italica v2.2
Defline:  (1 of 2) PTHR13131 - CYSTINOSIN Genomic Order:  2990
Name:  ? Seita.9G299000 Secondary Identifier:  ? PAC:32689673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G299000 0.5kb upstream 0.5kb upstream 5995 true scaffold_9: 34444431-34450425 Setaria italica
Seita.9G299000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34444431-34444930 Setaria italica
Seita.9G299000 0.5kb downstream 0.5kb downstream 5995 true scaffold_9: 34444931-34450925 Setaria italica
Seita.9G299000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34450426-34450925 Setaria italica
Seita.9G299000 1.0kb upstream 1.0kb upstream 6495 true scaffold_9: 34443931-34450425 Setaria italica
Seita.9G299000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34443931-34444930 Setaria italica
Seita.9G299000 1.0kb downstream 1.0kb downstream 6495 true scaffold_9: 34444931-34451425 Setaria italica
Seita.9G299000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34450426-34451425 Setaria italica
Seita.9G299000 2.0kb upstream 2.0kb upstream 7495 true scaffold_9: 34442931-34450425 Setaria italica
Seita.9G299000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34442931-34444930 Setaria italica
Seita.9G299000 2.0kb downstream 2.0kb downstream 7495 true scaffold_9: 34444931-34452425 Setaria italica
Seita.9G299000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34450426-34452425 Setaria italica
Seita.9G299000 5.0kb upstream 5.0kb upstream 10495 true scaffold_9: 34439931-34450425 Setaria italica
Seita.9G299000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34439931-34444930 Setaria italica
Seita.9G299000 5.0kb downstream 5.0kb downstream 10495 true scaffold_9: 34444931-34455425 Setaria italica
Seita.9G299000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34450426-34455425 Setaria italica
Seita.9G299000 10.0kb upstream 10.0kb upstream 15495 true scaffold_9: 34434931-34450425 Setaria italica
Seita.9G299000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34434931-34444930 Setaria italica
Seita.9G299000 10.0kb downstream 10.0kb downstream 15495 true scaffold_9: 34444931-34460425 Setaria italica
Seita.9G299000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34450426-34460425 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178195 5267 Panicoideae View MSA
124578500 5269 Grass View MSA
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.999        
cufflinks 2.184        
cufflinks 2.813        
cufflinks 2.108        
cufflinks 2.061        
cufflinks 2.196        
cufflinks 3.05        
cufflinks 2.958        
cufflinks 1.336       Low
cufflinks 2.949        
cufflinks 3.088        
cufflinks 2.98        
cufflinks 2.736        
cufflinks 3.735       High
cufflinks 4.953       High
cufflinks 2.653        
cufflinks 3.761       High
cufflinks 1.591       Low
cufflinks 3.451        
cufflinks 3.173        

0 Strain