Gene : Seita.9G300900 S. italica v2.2
Defline:  (1 of 6) 2.7.1.134 - Inositol-tetrakisphosphate 1-kinase / Inositol-trisphosphate 6-kinase Genomic Order:  3009
Name:  ? Seita.9G300900 Secondary Identifier:  ? PAC:32693278
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6365 Setaria italica pathologic  
Sitalica PWY-6366 Setaria italica pathologic  
Sitalica PWY-6554 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G300900 0.5kb upstream 0.5kb upstream 7661 true scaffold_9: 34828666-34836326 Setaria italica
Seita.9G300900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34828666-34829165 Setaria italica
Seita.9G300900 0.5kb downstream 0.5kb downstream 7661 true scaffold_9: 34829166-34836826 Setaria italica
Seita.9G300900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34836327-34836826 Setaria italica
Seita.9G300900 1.0kb upstream 1.0kb upstream 8161 true scaffold_9: 34828166-34836326 Setaria italica
Seita.9G300900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34828166-34829165 Setaria italica
Seita.9G300900 1.0kb downstream 1.0kb downstream 8161 true scaffold_9: 34829166-34837326 Setaria italica
Seita.9G300900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34836327-34837326 Setaria italica
Seita.9G300900 2.0kb upstream 2.0kb upstream 9161 true scaffold_9: 34827166-34836326 Setaria italica
Seita.9G300900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34827166-34829165 Setaria italica
Seita.9G300900 2.0kb downstream 2.0kb downstream 9161 true scaffold_9: 34829166-34838326 Setaria italica
Seita.9G300900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34836327-34838326 Setaria italica
Seita.9G300900 5.0kb upstream 5.0kb upstream 12161 true scaffold_9: 34824166-34836326 Setaria italica
Seita.9G300900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34824166-34829165 Setaria italica
Seita.9G300900 5.0kb downstream 5.0kb downstream 12161 true scaffold_9: 34829166-34841326 Setaria italica
Seita.9G300900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34836327-34841326 Setaria italica
Seita.9G300900 10.0kb upstream 10.0kb upstream 17161 true scaffold_9: 34819166-34836326 Setaria italica
Seita.9G300900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34819166-34829165 Setaria italica
Seita.9G300900 10.0kb downstream 10.0kb downstream 17161 true scaffold_9: 34829166-34846326 Setaria italica
Seita.9G300900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34836327-34846326 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041123 5273 Angiosperm View MSA
122176188 5267 Panicoideae View MSA
124570359 5269 Grass View MSA
121347833 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.302        
cufflinks 6.752        
cufflinks 8.098        
cufflinks 8.881        
cufflinks 6.322        
cufflinks 10.094        
cufflinks 8.554        
cufflinks 10.925       High
cufflinks 9.138        
cufflinks 4.117       Low
cufflinks 4.484       Low
cufflinks 8.665        
cufflinks 12.363       High
cufflinks 8.18        
cufflinks 3.842       Low
cufflinks 7.511        
cufflinks 13.812       High
cufflinks 4.78       Low
cufflinks 7.567        
cufflinks 4.919       Low

0 Strain