Gene : Seita.9G304600 S. italica v2.2
Defline:  (1 of 1) PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  3046
Name:  ? Seita.9G304600 Secondary Identifier:  ? PAC:32689808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G304600 0.5kb upstream 0.5kb upstream 8338 true scaffold_9: 35213807-35222144 Setaria italica
Seita.9G304600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35221645-35222144 Setaria italica
Seita.9G304600 0.5kb downstream 0.5kb downstream 8338 true scaffold_9: 35213307-35221644 Setaria italica
Seita.9G304600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35213307-35213806 Setaria italica
Seita.9G304600 1.0kb upstream 1.0kb upstream 8838 true scaffold_9: 35213807-35222644 Setaria italica
Seita.9G304600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35221645-35222644 Setaria italica
Seita.9G304600 1.0kb downstream 1.0kb downstream 8838 true scaffold_9: 35212807-35221644 Setaria italica
Seita.9G304600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35212807-35213806 Setaria italica
Seita.9G304600 2.0kb upstream 2.0kb upstream 9838 true scaffold_9: 35213807-35223644 Setaria italica
Seita.9G304600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35221645-35223644 Setaria italica
Seita.9G304600 2.0kb downstream 2.0kb downstream 9838 true scaffold_9: 35211807-35221644 Setaria italica
Seita.9G304600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35211807-35213806 Setaria italica
Seita.9G304600 5.0kb upstream 5.0kb upstream 12838 true scaffold_9: 35213807-35226644 Setaria italica
Seita.9G304600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35221645-35226644 Setaria italica
Seita.9G304600 5.0kb downstream 5.0kb downstream 12838 true scaffold_9: 35208807-35221644 Setaria italica
Seita.9G304600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35208807-35213806 Setaria italica
Seita.9G304600 10.0kb upstream 10.0kb upstream 17838 true scaffold_9: 35213807-35231644 Setaria italica
Seita.9G304600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35221645-35231644 Setaria italica
Seita.9G304600 10.0kb downstream 10.0kb downstream 17838 true scaffold_9: 35203807-35221644 Setaria italica
Seita.9G304600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35203807-35213806 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177870 5267 Panicoideae View MSA
124589262 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.745     High  
cufflinks 14.863     High High
cufflinks 12.952     High  
cufflinks 11.27     High  
cufflinks 8.704       Low
cufflinks 13.769     High  
cufflinks 11.127        
cufflinks 9.718        
cufflinks 7.69       Low
cufflinks 5.572       Low
cufflinks 11.211        
cufflinks 12.695        
cufflinks 12.064        
cufflinks 12.663        
cufflinks 13.178        
cufflinks 9.904        
cufflinks 10.755        
cufflinks 12.723     High  
cufflinks 12.627     High  
cufflinks 11.567        

0 Strain