Gene : Seita.9G303700 S. italica v2.2
Defline:  (1 of 1) PTHR10774//PTHR10774:SF95 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  3037
Name:  ? Seita.9G303700 Secondary Identifier:  ? PAC:32687659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G303700 0.5kb upstream 0.5kb upstream 7031 true scaffold_9: 35143626-35150656 Setaria italica
Seita.9G303700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35143626-35144125 Setaria italica
Seita.9G303700 0.5kb downstream 0.5kb downstream 7031 true scaffold_9: 35144126-35151156 Setaria italica
Seita.9G303700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35150657-35151156 Setaria italica
Seita.9G303700 1.0kb upstream 1.0kb upstream 7531 true scaffold_9: 35143126-35150656 Setaria italica
Seita.9G303700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35143126-35144125 Setaria italica
Seita.9G303700 1.0kb downstream 1.0kb downstream 7531 true scaffold_9: 35144126-35151656 Setaria italica
Seita.9G303700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35150657-35151656 Setaria italica
Seita.9G303700 2.0kb upstream 2.0kb upstream 8531 true scaffold_9: 35142126-35150656 Setaria italica
Seita.9G303700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35142126-35144125 Setaria italica
Seita.9G303700 2.0kb downstream 2.0kb downstream 8531 true scaffold_9: 35144126-35152656 Setaria italica
Seita.9G303700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35150657-35152656 Setaria italica
Seita.9G303700 5.0kb upstream 5.0kb upstream 11531 true scaffold_9: 35139126-35150656 Setaria italica
Seita.9G303700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35139126-35144125 Setaria italica
Seita.9G303700 5.0kb downstream 5.0kb downstream 11531 true scaffold_9: 35144126-35155656 Setaria italica
Seita.9G303700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35150657-35155656 Setaria italica
Seita.9G303700 10.0kb upstream 10.0kb upstream 16531 true scaffold_9: 35134126-35150656 Setaria italica
Seita.9G303700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35134126-35144125 Setaria italica
Seita.9G303700 10.0kb downstream 10.0kb downstream 16531 true scaffold_9: 35144126-35160656 Setaria italica
Seita.9G303700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35150657-35160656 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178662 5267 Panicoideae View MSA
124581665 5269 Grass View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.522        
cufflinks 8.151       High
cufflinks 1.797       Low
cufflinks 1.764       Low
cufflinks 1.623       Low
cufflinks 6.808       High
cufflinks 4.437        
cufflinks 4.132        
cufflinks 2.701        
cufflinks 3.52        
cufflinks 4.566        
cufflinks 3.945        
cufflinks 3.446        
cufflinks 1.565       Low
cufflinks 4.958        
cufflinks 2.939        
cufflinks 4.533        
cufflinks 2.345        
cufflinks 1.935       Low
cufflinks 4.611        

0 Strain