Gene : Seita.9G311300 S. italica v2.2
Defline:  (1 of 1) PTHR11669//PTHR11669:SF13 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT Genomic Order:  3113
Name:  ? Seita.9G311300 Secondary Identifier:  ? PAC:32688243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G311300 0.5kb upstream 0.5kb upstream 6104 true scaffold_9: 35938559-35944662 Setaria italica
Seita.9G311300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35938559-35939058 Setaria italica
Seita.9G311300 0.5kb downstream 0.5kb downstream 6104 true scaffold_9: 35939059-35945162 Setaria italica
Seita.9G311300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35944663-35945162 Setaria italica
Seita.9G311300 1.0kb upstream 1.0kb upstream 6604 true scaffold_9: 35938059-35944662 Setaria italica
Seita.9G311300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35938059-35939058 Setaria italica
Seita.9G311300 1.0kb downstream 1.0kb downstream 6604 true scaffold_9: 35939059-35945662 Setaria italica
Seita.9G311300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35944663-35945662 Setaria italica
Seita.9G311300 2.0kb upstream 2.0kb upstream 7604 true scaffold_9: 35937059-35944662 Setaria italica
Seita.9G311300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35937059-35939058 Setaria italica
Seita.9G311300 2.0kb downstream 2.0kb downstream 7604 true scaffold_9: 35939059-35946662 Setaria italica
Seita.9G311300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35944663-35946662 Setaria italica
Seita.9G311300 5.0kb upstream 5.0kb upstream 10604 true scaffold_9: 35934059-35944662 Setaria italica
Seita.9G311300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35934059-35939058 Setaria italica
Seita.9G311300 5.0kb downstream 5.0kb downstream 10604 true scaffold_9: 35939059-35949662 Setaria italica
Seita.9G311300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35944663-35949662 Setaria italica
Seita.9G311300 10.0kb upstream 10.0kb upstream 15604 true scaffold_9: 35929059-35944662 Setaria italica
Seita.9G311300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35929059-35939058 Setaria italica
Seita.9G311300 10.0kb downstream 10.0kb downstream 15604 true scaffold_9: 35939059-35954662 Setaria italica
Seita.9G311300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35944663-35954662 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026695 5273 Angiosperm View MSA
122178652 5267 Panicoideae View MSA
124582051 5269 Grass View MSA
121296483 5274 Embryophyte View MSA
123334635 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain