Gene : Seita.9G314100 S. italica v2.2
Defline:  (1 of 3) PTHR23077:SF55 - NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE Genomic Order:  3141
Name:  ? Seita.9G314100 Secondary Identifier:  ? PAC:32688152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G314100 0.5kb upstream 0.5kb upstream 5262 true scaffold_9: 36197819-36203080 Setaria italica
Seita.9G314100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36197819-36198318 Setaria italica
Seita.9G314100 0.5kb downstream 0.5kb downstream 5262 true scaffold_9: 36198319-36203580 Setaria italica
Seita.9G314100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36203081-36203580 Setaria italica
Seita.9G314100 1.0kb upstream 1.0kb upstream 5762 true scaffold_9: 36197319-36203080 Setaria italica
Seita.9G314100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36197319-36198318 Setaria italica
Seita.9G314100 1.0kb downstream 1.0kb downstream 5762 true scaffold_9: 36198319-36204080 Setaria italica
Seita.9G314100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36203081-36204080 Setaria italica
Seita.9G314100 2.0kb upstream 2.0kb upstream 6762 true scaffold_9: 36196319-36203080 Setaria italica
Seita.9G314100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36196319-36198318 Setaria italica
Seita.9G314100 2.0kb downstream 2.0kb downstream 6762 true scaffold_9: 36198319-36205080 Setaria italica
Seita.9G314100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36203081-36205080 Setaria italica
Seita.9G314100 5.0kb upstream 5.0kb upstream 9762 true scaffold_9: 36193319-36203080 Setaria italica
Seita.9G314100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36193319-36198318 Setaria italica
Seita.9G314100 5.0kb downstream 5.0kb downstream 9762 true scaffold_9: 36198319-36208080 Setaria italica
Seita.9G314100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36203081-36208080 Setaria italica
Seita.9G314100 10.0kb upstream 10.0kb upstream 14762 true scaffold_9: 36188319-36203080 Setaria italica
Seita.9G314100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36188319-36198318 Setaria italica
Seita.9G314100 10.0kb downstream 10.0kb downstream 14762 true scaffold_9: 36198319-36213080 Setaria italica
Seita.9G314100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36203081-36213080 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122065817 5267 Panicoideae View MSA
124365041 5269 Grass View MSA
122045822 5273 Angiosperm View MSA
121351435 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.374       High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.296       High
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.013     Low  
cufflinks 0.035     Low  
cufflinks 0.033     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.033     Low  
cufflinks 0.007     Low  
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  

0 Strain