Gene : Seita.9G319500 S. italica v2.2
Genomic Order:  3195 Name:  ? Seita.9G319500
Secondary Identifier:  ? PAC:32691728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G319500 0.5kb upstream 0.5kb upstream 7282 true scaffold_9: 36747310-36754591 Setaria italica
Seita.9G319500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36754092-36754591 Setaria italica
Seita.9G319500 0.5kb downstream 0.5kb downstream 7282 true scaffold_9: 36746810-36754091 Setaria italica
Seita.9G319500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36746810-36747309 Setaria italica
Seita.9G319500 1.0kb upstream 1.0kb upstream 7782 true scaffold_9: 36747310-36755091 Setaria italica
Seita.9G319500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36754092-36755091 Setaria italica
Seita.9G319500 1.0kb downstream 1.0kb downstream 7782 true scaffold_9: 36746310-36754091 Setaria italica
Seita.9G319500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36746310-36747309 Setaria italica
Seita.9G319500 2.0kb upstream 2.0kb upstream 8782 true scaffold_9: 36747310-36756091 Setaria italica
Seita.9G319500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36754092-36756091 Setaria italica
Seita.9G319500 2.0kb downstream 2.0kb downstream 8782 true scaffold_9: 36745310-36754091 Setaria italica
Seita.9G319500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36745310-36747309 Setaria italica
Seita.9G319500 5.0kb upstream 5.0kb upstream 11782 true scaffold_9: 36747310-36759091 Setaria italica
Seita.9G319500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36754092-36759091 Setaria italica
Seita.9G319500 5.0kb downstream 5.0kb downstream 11782 true scaffold_9: 36742310-36754091 Setaria italica
Seita.9G319500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36742310-36747309 Setaria italica
Seita.9G319500 10.0kb upstream 10.0kb upstream 16782 true scaffold_9: 36747310-36764091 Setaria italica
Seita.9G319500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36754092-36764091 Setaria italica
Seita.9G319500 10.0kb downstream 10.0kb downstream 16782 true scaffold_9: 36737310-36754091 Setaria italica
Seita.9G319500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36737310-36747309 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041519 5273 Angiosperm View MSA
122188450 5267 Panicoideae View MSA
124588605 5269 Grass View MSA
121351305 5274 Embryophyte View MSA
123426139 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.273        
cufflinks 0.892        
cufflinks 0.548       Low
cufflinks 0.407       Low
cufflinks 0.684        
cufflinks 0.914        
cufflinks 1.472        
cufflinks 2.409       High
cufflinks 2.476       High
cufflinks 1.056        
cufflinks 0.842        
cufflinks 0.899        
cufflinks 0.699        
cufflinks 0.981        
cufflinks 0.872        
cufflinks 1.949       High
cufflinks 1.118        
cufflinks 1.009        
cufflinks 0.805        
cufflinks 1.014        

0 Strain