Gene : Seita.9G318800 S. italica v2.2
Defline:  (1 of 1) PTHR15615:SF7 - CYCLIN-U4-2-RELATED Genomic Order:  3188
Name:  ? Seita.9G318800 Secondary Identifier:  ? PAC:32687092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G318800 0.5kb upstream 0.5kb upstream 3800 true scaffold_9: 36668806-36672605 Setaria italica
Seita.9G318800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36672106-36672605 Setaria italica
Seita.9G318800 0.5kb downstream 0.5kb downstream 3800 true scaffold_9: 36668306-36672105 Setaria italica
Seita.9G318800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36668306-36668805 Setaria italica
Seita.9G318800 1.0kb upstream 1.0kb upstream 4300 true scaffold_9: 36668806-36673105 Setaria italica
Seita.9G318800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36672106-36673105 Setaria italica
Seita.9G318800 1.0kb downstream 1.0kb downstream 4300 true scaffold_9: 36667806-36672105 Setaria italica
Seita.9G318800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36667806-36668805 Setaria italica
Seita.9G318800 2.0kb upstream 2.0kb upstream 5300 true scaffold_9: 36668806-36674105 Setaria italica
Seita.9G318800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36672106-36674105 Setaria italica
Seita.9G318800 2.0kb downstream 2.0kb downstream 5300 true scaffold_9: 36666806-36672105 Setaria italica
Seita.9G318800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36666806-36668805 Setaria italica
Seita.9G318800 5.0kb upstream 5.0kb upstream 8300 true scaffold_9: 36668806-36677105 Setaria italica
Seita.9G318800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36672106-36677105 Setaria italica
Seita.9G318800 5.0kb downstream 5.0kb downstream 8300 true scaffold_9: 36663806-36672105 Setaria italica
Seita.9G318800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36663806-36668805 Setaria italica
Seita.9G318800 10.0kb upstream 10.0kb upstream 13300 true scaffold_9: 36668806-36682105 Setaria italica
Seita.9G318800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36672106-36682105 Setaria italica
Seita.9G318800 10.0kb downstream 10.0kb downstream 13300 true scaffold_9: 36658806-36672105 Setaria italica
Seita.9G318800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36658806-36668805 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182486 5267 Panicoideae View MSA
124578111 5269 Grass View MSA
122043012 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.943        
cufflinks 1.612        
cufflinks 0.011     Low Low
cufflinks 0.074     Low Low
cufflinks 0.092       Low
cufflinks 2.197        
cufflinks 1.305        
cufflinks 1.091        
cufflinks 0.309        
cufflinks 3.931       High
cufflinks 1.835        
cufflinks 0.879        
cufflinks 1.454        
cufflinks 0.153        
cufflinks 1.738        
cufflinks 0.403        
cufflinks 1.965        
cufflinks 0.218        
cufflinks 0.32        
cufflinks 2.835       High

0 Strain