Gene : Seita.9G248600 S. italica v2.2
Defline:  (1 of 2) PTHR24073:SF350 - RAS-RELATED PROTEIN RABA4C Genomic Order:  2486
Name:  ? Seita.9G248600 Secondary Identifier:  ? PAC:32690718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G248600 0.5kb upstream 0.5kb upstream 5104 true scaffold_9: 19589347-19594450 Setaria italica
Seita.9G248600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 19593951-19594450 Setaria italica
Seita.9G248600 0.5kb downstream 0.5kb downstream 5104 true scaffold_9: 19588847-19593950 Setaria italica
Seita.9G248600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 19588847-19589346 Setaria italica
Seita.9G248600 1.0kb upstream 1.0kb upstream 5604 true scaffold_9: 19589347-19594950 Setaria italica
Seita.9G248600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 19593951-19594950 Setaria italica
Seita.9G248600 1.0kb downstream 1.0kb downstream 5604 true scaffold_9: 19588347-19593950 Setaria italica
Seita.9G248600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 19588347-19589346 Setaria italica
Seita.9G248600 2.0kb upstream 2.0kb upstream 6604 true scaffold_9: 19589347-19595950 Setaria italica
Seita.9G248600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 19593951-19595950 Setaria italica
Seita.9G248600 2.0kb downstream 2.0kb downstream 6604 true scaffold_9: 19587347-19593950 Setaria italica
Seita.9G248600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 19587347-19589346 Setaria italica
Seita.9G248600 5.0kb upstream 5.0kb upstream 9604 true scaffold_9: 19589347-19598950 Setaria italica
Seita.9G248600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 19593951-19598950 Setaria italica
Seita.9G248600 5.0kb downstream 5.0kb downstream 9604 true scaffold_9: 19584347-19593950 Setaria italica
Seita.9G248600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 19584347-19589346 Setaria italica
Seita.9G248600 10.0kb upstream 10.0kb upstream 14604 true scaffold_9: 19589347-19603950 Setaria italica
Seita.9G248600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 19593951-19603950 Setaria italica
Seita.9G248600 10.0kb downstream 10.0kb downstream 14604 true scaffold_9: 19579347-19593950 Setaria italica
Seita.9G248600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 19579347-19589346 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191684 5267 Panicoideae View MSA
124588863 5269 Grass View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.359        
cufflinks 11.592       High
cufflinks 4.675        
cufflinks 4.104       Low
cufflinks 4.613        
cufflinks 11.287       High
cufflinks 6.128        
cufflinks 8.761        
cufflinks 6.002        
cufflinks 9.636       High
cufflinks 7.843        
cufflinks 4.255       Low
cufflinks 6.058        
cufflinks 8.657        
cufflinks 8.008        
cufflinks 3.823       Low
cufflinks 7.862        
cufflinks 3.021       Low
cufflinks 6.829        
cufflinks 8.193        

0 Strain