Gene : Seita.9G260600 S. italica v2.2
Genomic Order:  2606 Name:  ? Seita.9G260600
Secondary Identifier:  ? PAC:32687539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G260600 0.5kb upstream 0.5kb upstream 4306 true scaffold_9: 21483621-21487926 Setaria italica
Seita.9G260600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 21487427-21487926 Setaria italica
Seita.9G260600 0.5kb downstream 0.5kb downstream 4306 true scaffold_9: 21483121-21487426 Setaria italica
Seita.9G260600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 21483121-21483620 Setaria italica
Seita.9G260600 1.0kb upstream 1.0kb upstream 4806 true scaffold_9: 21483621-21488426 Setaria italica
Seita.9G260600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 21487427-21488426 Setaria italica
Seita.9G260600 1.0kb downstream 1.0kb downstream 4806 true scaffold_9: 21482621-21487426 Setaria italica
Seita.9G260600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 21482621-21483620 Setaria italica
Seita.9G260600 2.0kb upstream 2.0kb upstream 5806 true scaffold_9: 21483621-21489426 Setaria italica
Seita.9G260600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 21487427-21489426 Setaria italica
Seita.9G260600 2.0kb downstream 2.0kb downstream 5806 true scaffold_9: 21481621-21487426 Setaria italica
Seita.9G260600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 21481621-21483620 Setaria italica
Seita.9G260600 5.0kb upstream 5.0kb upstream 8806 true scaffold_9: 21483621-21492426 Setaria italica
Seita.9G260600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 21487427-21492426 Setaria italica
Seita.9G260600 5.0kb downstream 5.0kb downstream 8806 true scaffold_9: 21478621-21487426 Setaria italica
Seita.9G260600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 21478621-21483620 Setaria italica
Seita.9G260600 10.0kb upstream 10.0kb upstream 13806 true scaffold_9: 21483621-21497426 Setaria italica
Seita.9G260600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 21487427-21497426 Setaria italica
Seita.9G260600 10.0kb downstream 10.0kb downstream 13806 true scaffold_9: 21473621-21487426 Setaria italica
Seita.9G260600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 21473621-21483620 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027878 5273 Angiosperm View MSA
122182287 5267 Panicoideae View MSA
124581088 5269 Grass View MSA
121297463 5274 Embryophyte View MSA
123335519 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.693        
cufflinks 4.681        
cufflinks 4.393        
cufflinks 3.767        
cufflinks 4.078        
cufflinks 5.132        
cufflinks 5.422        
cufflinks 5.654        
cufflinks 5.231        
cufflinks 2.031        
cufflinks 2.806        
cufflinks 1.696       Low
cufflinks 1.216       Low
cufflinks 3.668        
cufflinks 1.623       Low
cufflinks 10.072       High
cufflinks 2.364        
cufflinks 4.879        
cufflinks 3.262        
cufflinks 1.633       Low

0 Strain